Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1510 ATGGACCGCTACCCCTACTCCGAGCCCACCACCCCTGCCTCTTCCGTCCCGAGGGAAACCCTCTTTGTCTCCAACTCCAGCAACTCCCTCGTCTTCTCCAACTCCGGCAAGTCCCTCGTCGTCTCCGCCTCCGGCTCGCGCTTCGATCCGAGGAAGAAGTATGTTAGGCAGGTCACCGGCCGGCACAATGACACCGAGCTCCACCTCGCTGCCCAGCGCGGCGATGTTACTGCCGTTCGACGAATCCTTGCCGAGATCGATGATCAGATGACGGGAACCCTAAGCGGAGCTGAGTTTGATGCTGAGGTGGTGGAGATTAGGTCCGCGATCGTCAACGAAGTCAACGAATTGGGAGAGACGCCGCTGTTCACGGCCGCCGATAAGGGACACCTGGATGTCGTTAAAGAGCTTCTCCCTCACACCACCAAAGAGGCCCTTTCGTTCAAGAACCGTGCCGGCTTCTCTCCCTTGCACATTGCCGCTAAACAAGGTCATAAAGACATTGTAGAGGTGCTTCTAGACCATGATCCGGAGCTAAGCAAGACCTTTGGCCAATCAAATGCAACCCCTCTTGTCACTGCAGCTATGAAGGATCAAGCGGATGTTGTTGAGCTGTTGCTTAACAGAGATCCTAGCTTGTTGGAGATAGCTAAGTCCAATGGGAAGAACGCACTCCATTTATCTGGTCGGCAAGGGCACGTTGCTGTGGTGAAACTGTTGCTGGCCCATGATCCGCAACTCGCTCGGAGGACCGATAAGAAAGGACAAACTGCTCTGCACATGGCTGTGAAGGGGACTAGCTGTGAAGTGGTGAAGATGATTCTTAATGCAGATCCTGCAATAGTCATGTTGCCTAACAAGTTTGGAAACAATGCATTGCATATAGCCACCAGGAAGAAAAGGGTAGAGATAGTGAATGAACTGTTACTTCATCCTGACACCAATGTGAATGCCCTATCAAGAGACCAGAAAACGGCTCTTGACATTGCTGAAGGACTTCCAGTGTCCGAAGAATCCTGGGAGATAAAAGACTGCCTTGTCCGTTTTGGTGCATGTAAATCCAGTGACCTCAAGCAACCAAGGGACGAGCTGAGGAAAACTATGACACAGATCAAAATGGACGTCTCCTGCCAGCTCGAACAAGCCCGGAGAACAAGCAGGAATGTAAGCGGGATTGCGAAGGAGCTGCAGAAGTTGCACCAAAGCGGAATCCATAATGCCACAAATTCAGTAACCGTTGTGGCCTCGCTGTTTGCAACGGTTGCATTTGCAGCAATCTTCACTGTTCCTGGTGGTGATGATGATTCGGGCAAGGCCGTGGTGGTGCACACTGCGTCCTTCAAGGCCTTCTTCATATCCAATGCTATTTCGCTCTTTGTTTCACTGGTTGTTGTGGTGGTTCAGATCACGGTTGTTAGAGGGGAGACAAAGTCCGAAAGAAGAGTTACAGAAATTATCAATAAGATGCTGTGGTTGGCTTCAGTTTGCACCTCTGTTTCATTCATGGCGGCGTCTTATATAGTTGTTGGTCGCCGCAGCAGGTGGGCTGCAATCCTTATTACAGTCATAGGGACTGTTGTAACAGTTGCCGTTCTTGGTACCATGACTTACTTTGTGCTGAAATCCAAACGTCTCCGAAGAGAAAGGAAGAAGTTCAAAAGGATTAAAACATCTTCTTGGCGGTGTTCAGATTCTGAAACTGAAGTGGATCCAATTTATGCCATCTAG 1728 0.5017 MDRYPYSEPTTPASSVPRETLFVSNSSNSLVFSNSGKSLVVSASGSRFDPRKKYVRQVTGRHNDTELHLAAQRGDVTAVRRILAEIDDQMTGTLSGAEFDAEVVEIRSAIVNEVNELGETPLFTAADKGHLDVVKELLPHTTKEALSFKNRAGFSPLHIAAKQGHKDIVEVLLDHDPELSKTFGQSNATPLVTAAMKDQADVVELLLNRDPSLLEIAKSNGKNALHLSGRQGHVAVVKLLLAHDPQLARRTDKKGQTALHMAVKGTSCEVVKMILNADPAIVMLPNKFGNNALHIATRKKRVEIVNELLLHPDTNVNALSRDQKTALDIAEGLPVSEESWEIKDCLVRFGACKSSDLKQPRDELRKTMTQIKMDVSCQLEQARRTSRNVSGIAKELQKLHQSGIHNATNSVTVVASLFATVAFAAIFTVPGGDDDSGKAVVVHTASFKAFFISNAISLFVSLVVVVVQITVVRGETKSERRVTEIINKMLWLASVCTSVSFMAASYIVVGRRSRWAAILITVIGTVVTVAVLGTMTYFVLKSKRLRRERKKFKRIKTSSWRCSDSETEVDPIYAI* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1510 575 Pfam Ankyrin repeats (3 copies) 252 317 IPR002110 GO:0005515
Ahy16g1510 575 Pfam Ankyrin repeats (3 copies) 67 178 IPR002110 GO:0005515
Ahy16g1510 575 Pfam Ankyrin repeats (3 copies) 187 244 IPR002110 GO:0005515
Ahy16g1510 575 ProSiteProfiles Ankyrin repeat profile. 117 138 IPR002110 GO:0005515
Ahy16g1510 575 ProSiteProfiles Ankyrin repeat profile. 288 321 IPR002110 GO:0005515
Ahy16g1510 575 ProSiteProfiles Ankyrin repeat profile. 152 180 IPR002110 GO:0005515
Ahy16g1510 575 ProSiteProfiles Ankyrin repeat region circular profile. 220 241 - -
Ahy16g1510 575 Pfam Domain of unknown function 403 508 IPR026961 -
Ahy16g1510 575 SUPERFAMILY Ankyrin repeat 67 333 IPR036770 -
Ahy16g1510 575 PANTHER CASKIN 32 568 - -
Ahy16g1510 575 ProSiteProfiles Ankyrin repeat region circular profile. 117 138 - -
Ahy16g1510 575 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1 32 568 - -
Ahy16g1510 575 SMART ANK_2a 254 283 IPR002110 GO:0005515
Ahy16g1510 575 SMART ANK_2a 220 249 IPR002110 GO:0005515
Ahy16g1510 575 SMART ANK_2a 152 181 IPR002110 GO:0005515
Ahy16g1510 575 SMART ANK_2a 288 318 IPR002110 GO:0005515
Ahy16g1510 575 SMART ANK_2a 62 91 IPR002110 GO:0005515
Ahy16g1510 575 SMART ANK_2a 117 145 IPR002110 GO:0005515
Ahy16g1510 575 SMART ANK_2a 186 215 IPR002110 GO:0005515
Ahy16g1510 575 Gene3D - 42 215 IPR036770 -
Ahy16g1510 575 ProSiteProfiles Ankyrin repeat profile. 220 252 IPR002110 GO:0005515
Ahy16g1510 575 Gene3D - 216 410 IPR036770 -
Ahy16g1510 575 ProSiteProfiles Ankyrin repeat region circular profile. 152 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1510 Ahy-Chr16 33936148 33939547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1510 1 575 Miscellaneous Gene Families AT3G09550 66.105 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1510 - - gmx:100801840 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1510 16 33936148 33939547 Ahy6g1364 6 21936631 21940236 hybridization