Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1406 ATGGGAGATAGTGAAACAGTAGTTGCCGAAGCACCTGCAGCTGAGACACATGCTGCTGCTGGGTTTGGTGACTCTGCCTCAAACCCTACTCAGGAAGCAGCTTCTACTGTTGCTGAGCCTGCTGCAGAGGCTGTTACTCAAGCCAATTCAGCTTATGCCTTAGGTTATTCGAATACTGGCGACGGGAATGCTTATGCTGGGGATCCTAATGCTATGCAACCAGAAGCCCAAACCAATTCAATGGAGGATTCCAAGCAAGGTACTGAAGCTCCAAGTGGGCTTGGAAGTGCAGCTACAGGCTCAAGTCAAGTAAATGGTGGTCCAGTGGGTGCAATAGCAAATGCAACAGGACTTGAAAATGGGAATGCATTAGGGAACACTGATGGATCGGCTGATGAGAAACAGCTTGTGGATGGTTATGCTGCCATGTCTGCTGAAGAAGATCGACTGTGGAATATTGTAAGAGCTAATTCTTCAGATTTTACGGCTTGGACTTCCTTGATCGAAGAGACAGAGAAGGTGGCCGAGGATAACATTCTGAAGATTCGAAGAGTTTATGATGCTTTTCTAGCTGAGTTTCCCTTATGTTATGGTTATTGGAAGAAATATGCTGATCATGAGGCACGGCTTGGCTCTGTCGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGTGTTACCTATTCAGTGGATATGTGGTTGCATTATTGCATATTTGCTATAGGCACGTATGGGGATCCAGACACTGTGCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGGACAGATTATCTTTCTTTTCCTCTTTGGGACAAGTACATTGAATATGAGTACATGCAGCAAGACTGGGCCCGTCTTGCCAATATCTACACTAGAATATTAGAGAATCCAAATCAGCAACTGGATCGATATTTCAACAGCTTCAAGGAGTTAGCTGCAAATCGACCTCTTTCAGAGCTACAAACTGCTGATGAAGCTGCTGTAGTGGCAGGTGCTGCTTCAGAGGCTGCTGACCAAACTGTTGAGGGAGAGGTTCGTCCTGATGGTGCAGAAAATTCTCCTAAACCTGTAAGTGCTGGATTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCATACTTTCATGTACGGCCACTCAATGTTGGAGAGCTTGAAAATTGGCATAATTATCTGGATTTTATAGAGAGGGAAGGTGACTTAAGCAAGATTGTCAAGTTATATGAGCGGTGTGTCATTGCATGTGCCAATTACCCTGAGTACTGGATACGCTATATTTTGTGTATGGAAGCCAGTGGAAGTATGGATCTTGCAAATAATGTGCTTGCTCGGGCAACCCAAGTCTTTGTCAAGAGGCAACCTGAAATACATCTTTTTTCTGCTCGGTTTAAGGAGCAGTCTGGAGATATAGCTGGTGCTAGAGCTGCCTATCAACTTGTTCATACTGAAATTTCTCCTGGTCTTCTTGAAGCGATAATCAAGCACGCGAATATGGAACATCGACTGGGAAAGTTGGAGGATGCCTTCTCTTTGTATGAACAAGCCATTGCCATTGAAAAGGGAAAAGAACATTCCCAAACATTGCCGATGCTGTTTGCTCAATTTTCTCGATTCGTCTATTTGGCTTCTGGGAATGCAGAAAAGGCAAGACAGATTCTAGTTGAAGGGGTTGAGAATGTTATGATGTCGAAACCGCTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAGCCCCCACCAAAGCGAGTTGATATGAACTATTTGGAGTCATTGGTAGTCAAATTTATAATGCCTAACCCTGAGAGTCCTGGTGTTGTAAGTGCAGCTGAGCGGGAGGAACTTTCTAGCATTTTTTTGGAGTTTTTGAATCTCTTTGGAGATGTCCAATCTATCAAGAGGTGTGAGGATAGGCATGCCAAATTGTTCTTGCCACACAGGAGCATGTCAGAGTTAAAAAAACGTCATGCTGAGGACTTTTTAGCTTCAGATAAAGCAAAAATGGCAAGATCTTATTCTGTTCCATCAGCTGCTCAATCTGCAGTGGGTGCATATCCAAATGCACAGAATCAGTGGGCTAATTATGGTGTACAACCTCAAGCTTGGCCACCAGCCACACAGGCACAACAGTGGCCTGCTGGCTACACTCAGCCGGCTTCATATGGGGCTTATGCTGGATATGGAGCTAACTATCCAAATTCTCAGGTGCCTGCATCAGTTCCACAAAATACTGCTTATGGAGCCTATCCAGCAGCATATCCGGTACAGCCAGCCGTTCCCCAGCAAAGTTATGCACAACCTGCAGCGGCTGTGGCTCCTGCAGCGGCTGTGGCTCCTGCACAGCAACCTGCTGCAGTTCCTCAAGCCTATTACGGGAGTTATTACTGA 2466 0.4477 MGDSETVVAEAPAAETHAAAGFGDSASNPTQEAASTVAEPAAEAVTQANSAYALGYSNTGDGNAYAGDPNAMQPEAQTNSMEDSKQGTEAPSGLGSAATGSSQVNGGPVGAIANATGLENGNALGNTDGSADEKQLVDGYAAMSAEEDRLWNIVRANSSDFTAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAIGTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLANIYTRILENPNQQLDRYFNSFKELAANRPLSELQTADEAAVVAGAASEAADQTVEGEVRPDGAENSPKPVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYILCMEASGSMDLANNVLARATQVFVKRQPEIHLFSARFKEQSGDIAGARAAYQLVHTEISPGLLEAIIKHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQFSRFVYLASGNAEKARQILVEGVENVMMSKPLLEALLHFEAIQPPPKRVDMNYLESLVVKFIMPNPESPGVVSAAEREELSSIFLEFLNLFGDVQSIKRCEDRHAKLFLPHRSMSELKKRHAEDFLASDKAKMARSYSVPSAAQSAVGAYPNAQNQWANYGVQPQAWPPATQAQQWPAGYTQPASYGAYAGYGANYPNSQVPASVPQNTAYGAYPAAYPVQPAVPQQSYAQPAAAVAPAAAVAPAQQPAAVPQAYYGSYY* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1406 821 MobiDBLite consensus disorder prediction 72 109 - -
Ahy16g1406 821 Gene3D Tetratricopeptide repeat domain 406 707 IPR011990 GO:0005515
Ahy16g1406 821 MobiDBLite consensus disorder prediction 64 111 - -
Ahy16g1406 821 MobiDBLite consensus disorder prediction 340 359 - -
Ahy16g1406 821 SUPERFAMILY TPR-like 370 673 IPR011990 GO:0005515
Ahy16g1406 821 SUPERFAMILY TPR-like 154 316 IPR011990 GO:0005515
Ahy16g1406 821 SMART hat_new_1 426 458 IPR003107 GO:0006396
Ahy16g1406 821 SMART hat_new_1 530 565 IPR003107 GO:0006396
Ahy16g1406 821 SMART hat_new_1 246 281 IPR003107 GO:0006396
Ahy16g1406 821 SMART hat_new_1 177 209 IPR003107 GO:0006396
Ahy16g1406 821 SMART hat_new_1 283 316 IPR003107 GO:0006396
Ahy16g1406 821 SMART hat_new_1 571 603 IPR003107 GO:0006396
Ahy16g1406 821 SMART hat_new_1 211 243 IPR003107 GO:0006396
Ahy16g1406 821 MobiDBLite consensus disorder prediction 1 42 - -
Ahy16g1406 821 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 32 798 - -
Ahy16g1406 821 Gene3D Tetratricopeptide repeat domain 152 321 IPR011990 GO:0005515
Ahy16g1406 821 PANTHER PRE-MRNA-PROCESSING FACTOR 39 32 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1406 Ahy-Chr16 28484006 28492151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1406 K13217 - gmx:100787373 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1406 16 28484006 28492151 Ahy6g0062 6 883979 892114 hybridization