Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1395 ATGGTTTTGATAACTCTAGCAGTGTCAGTACGGGCACTGAGGCCACCGCCATGTCCAGTGGGTGTAGACGACGCCAATTGCCCACGCGCCACCAAATTGCAACTGGACATATTCTTCTTGGCTCTGTACACTATTGCAGTTGGCACAGGTGGCACAAAGCCCAACATCTCAACAATGGGCGCAGACCAATTCGATGACTTTGAGCCCAAAGAGAGGCACCACAAGCTCTCTTTCTTCAATTGGTGGATGTTTAGCATCTTCTTTGGTACCCTTTTCTCCAACACTTTCTTGGTCTACATTCAAGAGAAAGTCAGTTGGACCATTGGGTATGGGCTTCCAACTATCGGGCTTGCAGTTTCAATATTGGTTTTTTTATTTGGAACTCCCTTGTATAGGCACAAGTTACCCTCTGGGAGCCCTATAACTAGGATTCTTCAGGTCTATGTTGCAGCATTGAGGAAGTGGAAAGTGCATATTCCTGGAGATCCAAAAGAGTTGCATGAACTAAGCATTGAGGAGTATGTCAGTAATGGGAGAACCAGGATTGATCATAGCCCTTCATTCAGTTTTCTAGACAAGGCGGCAACGAGGACAGACCAAACTTCACCGTGGATGCTTTGTACAGTGACACAAGTTGAGGAGACAAAGCAAATGACCAAAATGGTCCCTATTTTGATCACAACTCTTCTACCAAGCACCATGCTAATTCAAGCAACCACACTCTTCATAAAACAAGGCAACACCCTAAACAGGAGTATGGGACCAGATTTTGATATCCCCCCAGCTTGTCTCACATCATTCATAACCATCTTCATGCTCATTAGCATTGTTATCTATGATCGTGTATTTGTTCCCGTGATCCGGCGATATACCAAGAATCCCAGAGGGATTACACTTCTTCAGAGACTCGGAATTGGCCTCGTGATTCACATCATTGTGTTGATCACTGCGAGTTTTGTTGAGAGGAAGAGACTCAGCGTTGCAAGAGAACATAACCTCTTGCGCCAGCATGACCAACTTCCTCTCACTATTTTCATCTTGCTTCCTCAGTTTGCGCTGACGGGGATTGCTGATAACTTTGTTGAAGTTGCGAAGCTGGAGTTCTTCTATGATCAAGCACCTGAAGGCATGAAGAGTATGGGAACATCATACTTCACCACCAGCTTGGGAATTGGAAGCTTTCTTGCTACTTTCCTTCTAACAACGGTTGCTAATCTCACCAAGAGAAATGGTCACAAGGGTTGGGTATTGAATAACCTGAACGTTTCACATTTGGATTATTATTATGCATTCATGGCAGGGCTGAGTTTTATCAACTTGCTTTGCTTTCTGGTTGTTGCCAAGTTCTTTGTATATAATGATGATGTAGCACAAAAGAAAACAGGCTTGGAGATGAACACTGCTTCATCTCAAGGCTATAGTAATAATAGAATTAGCCAAAACACCCCACATCTAGATCTCAATTAG 1467 0.4383 MVLITLAVSVRALRPPPCPVGVDDANCPRATKLQLDIFFLALYTIAVGTGGTKPNISTMGADQFDDFEPKERHHKLSFFNWWMFSIFFGTLFSNTFLVYIQEKVSWTIGYGLPTIGLAVSILVFLFGTPLYRHKLPSGSPITRILQVYVAALRKWKVHIPGDPKELHELSIEEYVSNGRTRIDHSPSFSFLDKAATRTDQTSPWMLCTVTQVEETKQMTKMVPILITTLLPSTMLIQATTLFIKQGNTLNRSMGPDFDIPPACLTSFITIFMLISIVIYDRVFVPVIRRYTKNPRGITLLQRLGIGLVIHIIVLITASFVERKRLSVAREHNLLRQHDQLPLTIFILLPQFALTGIADNFVEVAKLEFFYDQAPEGMKSMGTSYFTTSLGIGSFLATFLLTTVANLTKRNGHKGWVLNNLNVSHLDYYYAFMAGLSFINLLCFLVVAKFFVYNDDVAQKKTGLEMNTASSQGYSNNRISQNTPHLDLN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1395 488 Gene3D MFS general substrate transporter like domains 1 459 IPR036259 -
Ahy16g1395 488 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 1 463 - -
Ahy16g1395 488 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 463 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy16g1395 488 Pfam POT family 1 416 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy16g1395 488 MobiDBLite consensus disorder prediction 467 488 - -
Ahy16g1395 488 SUPERFAMILY MFS general substrate transporter 37 448 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1395 Ahy-Chr16 27900799 27903082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1395 1 456 Organic Solute Cotransporters AT5G46050 59.519 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1395 - - gmx:100807002 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1395 16 27900799 27903082 Ahy6g0070 6 1033944 1037072 hybridization