Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1393 ATGGCCAAGAAACCGCCACTCGTGCCCACGCATCTCCTCATCGGCCTCATCATCGCCGCCGTAGCTGTGGAGGGAGGTGGCTCCGGCGAAGGGGAGCTTGACTACAAGAAGCTATCGGGCATTATAATCCCAGGCTTCGCGTCCACTCAGCTTCGTGCGTGGTCCATCCTCGACTGCCCTTTCTCTCCCCTCGATTTCAACCCTCTCGATTTGGTCTGGCTCGACACCACCAAACTTCTTTCTGCTGTCAATTGCTGGCTTAAGTGCATGTTGCTTGATCCATACAATCAGACTGATCACCCTGATTGCAAGTCCCGCCCTGATAGTGGTCTTTCTGGTATTACAGAACTTGATCCAGGTTATATTACAGGGCCTCTTTCTTCGGTGTGGAAAGAGTGGATCAAGTGGTGTATTGAGTTTGGAATAGAAGCTAATGCAATAATGGCTGTTCCTTATGATTGGAGATTGTCACCATCAATGCTTGAAGAGCGAGACCTTTACTTTCATAAACTCAAGTATCAGGGAACAGCTCGATTGATGTTCAACTCCTTTTCTTCGTCATTGTGGATGATGCCCTTTTCCAAGTACTGTAGATCAAATAGTAATTATTGGAAGCATTTTTCTGGGGCAAGGCATGTAGGTAACCACACGTATCACTGTGAAGATAAGGAATTTCAGTCAAACTTCTCTGGATGGCCAACAAATTTAATCAACATTGAAATTCCTTCAACTCGTGGATTTGATGCATACCCTTCAATCACAGAAATACCTCAGTCTAATTTGTCTAGCATGGAGTGTGGAATACCTACACAATTATCTTTTTCAGCTCGCGAAATGTCAGATGGAACCTTTTTCAAGGCAATTGAAGATTACGATCCAGACAGCAAGAGGCTGTTGTACCAGTTAGAAAAATCATATATCAATGATCCTGTTCTTAATCCTCTGACACCTTGGGACCGGCCACCAATAAAAAATGTCTTCTGCATTTATGGCACTGATTCAAAGACTAAGGTTGGTTACTACTTTGCACCTAGTGGCAAGCCTTACCCTGATAACTGGATAATTACGGATATCATTTATGAGTTTGAAGGTTCTCTATACTCAAGGTCAGGGAATCTGATTGAAGGGAATCCTGGAGCCACAAGTGGAGATGAGACGGTACCATACAACTCCCTTGCATGGTGCAAGAGCTGGCTTGGACCAAAGGTGAACATAACAAGAGCGCCTCAGTCTGAGCATGATGGTACTGATGTACAAATTGAGTTGAATGTAGAACATCACCATGATGAAGATGTTGTTGCAAACATGACAAGATCACCAAAGGTTAAGTACATAACATATTATGAAGATTCTGAGAGTCTTCCAGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATTGTGAGATCACCGGTGCTAATGCGAGAGTTATGGCTTGAGATGTGGCATGATGTCCATCCTGATGCAAAATCAAAATTTGTCACAAAAGCTAAGCGAGGACCCTTGAGGGATGATGACTGTTATTGGGATTATGGCAAAGCTCGCTGTGCCTGGGCAGAATATTGTGAATATAGGTATGTCTTTGGTGATGTTCACCTGGGACAAAGCTGTAGGTTGAAATCTACTTCAACTAACCAGTTGTTGAATTATTTGTAA 1671 0.4363 MAKKPPLVPTHLLIGLIIAAVAVEGGGSGEGELDYKKLSGIIIPGFASTQLRAWSILDCPFSPLDFNPLDLVWLDTTKLLSAVNCWLKCMLLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIMAVPYDWRLSPSMLEERDLYFHKLKYQGTARLMFNSFSSSLWMMPFSKYCRSNSNYWKHFSGARHVGNHTYHCEDKEFQSNFSGWPTNLINIEIPSTRGFDAYPSITEIPQSNLSSMECGIPTQLSFSAREMSDGTFFKAIEDYDPDSKRLLYQLEKSYINDPVLNPLTPWDRPPIKNVFCIYGTDSKTKVGYYFAPSGKPYPDNWIITDIIYEFEGSLYSRSGNLIEGNPGATSGDETVPYNSLAWCKSWLGPKVNITRAPQSEHDGTDVQIELNVEHHHDEDVVANMTRSPKVKYITYYEDSESLPGKRTAVWELDKANHRNIVRSPVLMRELWLEMWHDVHPDAKSKFVTKAKRGPLRDDDCYWDYGKARCAWAEYCEYRYVFGDVHLGQSCRLKSTSTNQLLNYL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1393 556 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 174 539 - -
Ahy16g1393 556 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 29 173 - -
Ahy16g1393 556 Pfam Lecithin:cholesterol acyltransferase 174 426 IPR003386 GO:0006629|GO:0008374
Ahy16g1393 556 Pfam Lecithin:cholesterol acyltransferase 70 173 IPR003386 GO:0006629|GO:0008374
Ahy16g1393 556 Gene3D alpha/beta hydrolase 100 178 IPR029058 -
Ahy16g1393 556 PANTHER BNAA09G50730D PROTEIN 174 539 - -
Ahy16g1393 556 PANTHER BNAA09G50730D PROTEIN 29 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1393 Ahy-Chr16 27820899 27830160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1393 174 556 Acyl Lipid Metabolism Gene Families AT1G04010 72.917 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1393 - - ahf:112695174 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1393 16 27820899 27830160 Ahy6g0072 6 1049077 1057683 hybridization