Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1375 ATGTATCTTCAGTTTTACATAAACGACAATGGTGACAAGGTCTACACCACTAAGAAAGAAACACCGCTTGGCTTAGCTACACAATCTGCTCACCCTGCTCGGTTTTCACCGGATGACAAATATTCAAGGCAGAGGGTGCTTCTGAAGAAGCGTTTTGGACTATTACCAACCCAGCAACCACCTCCAAAGTATTGA 195 0.441 MYLQFYINDNGDKVYTTKKETPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY* 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1375 64 Pfam Nucleolar RNA-binding protein, Nop10p family 3 52 IPR007264 GO:0001522|GO:0030515|GO:0042254
Ahy16g1375 64 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 10 54 - -
Ahy16g1375 64 PANTHER NUCLEOLAR RNA-BINDING NOP10P-LIKE PROTEIN 1 64 - -
Ahy16g1375 64 PANTHER RIBOSOME BIOGENESIS PROTEIN NOP10 1 64 IPR007264 GO:0001522|GO:0030515|GO:0042254
Ahy16g1375 64 SUPERFAMILY Nop10-like SnoRNP 3 58 IPR036756 GO:0001522|GO:0030515|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1375 Ahy-Chr16 27374403 27375950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1375 K11130 - csv:101221807 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1375 16 27374403 27375950 Ahy6g0084 6 1153196 1154693 hybridization