Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1360 ATGGACAAGTTGAATCTTTCTCAACTGGGCGAGAAGCTGATGACGAGTGGGGCCCAAATGGGGCGAATGATGAGCGTCAAGATGAAGGAGGTGAAGGAGATGCTCCAGGCACCCACACCCGAATCCAAGATGGTCGAAGACGCCACCTCTGAAACCCTATCGGACCCTAATTGGGGCACTAACCTCAGGATCTGTGCCATGATCAACTCCGACCAACTCAACGGCTCTGAGGTTGTTAGGGCCATCAAGAGGAGACTCTCTCACAAGAACCCACTCGTTCACTCACTCACCCTTGACCTTCTCGAAGCCTCCGCCATGAACTGCGACAAAGTCTTCTCCGAGATCGCATCCGAGAAGCTTCTCGATGAAATGCTCGCCAAGCTCCTTGATAACCCTCAAGCTGATCCCAATGTTCGTCGCAGGGCGTTTCACCTCATTAGGGCTTGGGGCCAGTCTCAGGATCTCGCTTATCTCCCTGTCTTTCGTCAAACTTACACGAGTTTGCAAGAAAGGGCTGAACCAGTTGATGTAGGAGGAGGAAGTTCGCCCGGTGTTCCTCACAATTTAGGGTCTTATCTTCAACAACAGGGATTAGACCCTCCTTCAAGCTACCCTGTTCCCGAAGCTGGACTAGTTTCTATGGATGACTTAGCTTTTTCTTCCGGTCTCCAACACATGTCAGCTGAAGAGAAGAAAGAGCTTCTTGTAGTTGCACGAAACAGTCTTGAATTGCTATCTAGCATAATAAATTCTGAGGCAGAGCCCAAAACCTTGAAGGAAGATTTAACTCTCAGTTTGCTGGACAAGTGCAAGCACTCACTCTCTATCATGAAGGAAATTGCGGAAAGCACCACAGATGATGAAGAGACACTTTTTGAGGCTTTGTATCTTAATGATGAGCTGCAGCAGATAGTTTCCAAGTACGAGGAGTTGGAGGCTGCTCAACGGCCTGTGGCACAAGAGCCTCCAAATGCTGACACTGCAAAGCATGATGCGGAAGCTGTTCAAAATCCTATTGAACTTCCTAAAAGATTTGAAGAGGATGAGTCCGAAGAGTTCGAAGCTGCTCAGGAACTTGAAAGAAAGCTTCCCAAAAAGTCCAACGGTGTTGAAGCCAATGCAGCCAATGGGGATGGTCATCACGTTGAAACCACAATACTAGATGAGGCAGATGAGAAGGGCAACGCCGTATCTAGCCTCGAGCAATAG 1209 0.4864 MDKLNLSQLGEKLMTSGAQMGRMMSVKMKEVKEMLQAPTPESKMVEDATSETLSDPNWGTNLRICAMINSDQLNGSEVVRAIKRRLSHKNPLVHSLTLDLLEASAMNCDKVFSEIASEKLLDEMLAKLLDNPQADPNVRRRAFHLIRAWGQSQDLAYLPVFRQTYTSLQERAEPVDVGGGSSPGVPHNLGSYLQQQGLDPPSSYPVPEAGLVSMDDLAFSSGLQHMSAEEKKELLVVARNSLELLSSIINSEAEPKTLKEDLTLSLLDKCKHSLSIMKEIAESTTDDEETLFEALYLNDELQQIVSKYEELEAAQRPVAQEPPNADTAKHDAEAVQNPIELPKRFEEDESEEFEAAQELERKLPKKSNGVEANAANGDGHHVETTILDEADEKGNAVSSLEQ* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1360 402 Gene3D - 229 323 IPR038425 -
Ahy16g1360 402 ProSiteProfiles VHS domain profile. 48 176 IPR002014 GO:0035091|GO:0043130
Ahy16g1360 402 Pfam VHS domain 42 152 IPR002014 GO:0035091|GO:0043130
Ahy16g1360 402 ProSiteProfiles GAT domain profile. 226 313 IPR004152 GO:0035091|GO:0043130
Ahy16g1360 402 PANTHER TOM1-LIKE PROTEIN 1 1 359 IPR044836 GO:0035091|GO:0043130|GO:0043328
Ahy16g1360 402 MobiDBLite consensus disorder prediction 382 396 - -
Ahy16g1360 402 Gene3D - 32 177 IPR008942 -
Ahy16g1360 402 SMART VHS_2 41 172 IPR002014 GO:0035091|GO:0043130
Ahy16g1360 402 SUPERFAMILY GAT-like domain 201 312 - -
Ahy16g1360 402 PANTHER TOM1-LIKE PROTEIN 2 1 359 - -
Ahy16g1360 402 CDD VHS 42 168 - -
Ahy16g1360 402 Pfam GAT domain 239 312 IPR004152 GO:0035091|GO:0043130
Ahy16g1360 402 SUPERFAMILY ENTH/VHS domain 37 170 IPR008942 -
Ahy16g1360 402 MobiDBLite consensus disorder prediction 315 402 - -
Ahy16g1360 402 MobiDBLite consensus disorder prediction 336 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1360 Ahy-Chr16 26728536 26730497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1360 - - gmx:100803803 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1360 16 26728536 26730497 Ahy6g0095 6 1341702 1343068 hybridization