Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1124 ATGGATTTGGTAACCGATCCAACAAACCGGAGCTTCGAAATCCAGAGCCTGGTGAATCCAACAGCAGCAACAAACACCAATCCTCCACCTTCGTCATCTTCATCGCCGAGCCGTTACGAGAACCAAAAGCGCCGAGACTGGAACACCTTCTGCCAGTACCTGAGGAACCACCGTCCGCCGCTGTCTCTGCCGCTCTGCAGCGGCGCACACGTTCTGGAGTTCCTCCATTACCTGGATCAGTTCGGGAAGACCAAGGTGCACAACCCTACGTGCCCCTTCTTCGGGCTCCCTAACCCTCCGGCGCCCTGCCCCTGCCCGCTCCGCCAGGCCTGGGGCAGCCTGGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCAGAGCAGAGACGAATCCGTTCGGCGCTCGTGCCGTTAGGATTTACCTGAGAGATGTTCGTGATTTTCAGTCAAAAGCAAGAGGAGTAAGCTACGAGAAGAAGCGCAAGAGGCCAAAGCCTAAAACCTCTTCTTCTTCTTCTGATGCTTCTGCTACTCATGCTTAA 555 0.5748 MDLVTDPTNRSFEIQSLVNPTAATNTNPPPSSSSSPSRYENQKRRDWNTFCQYLRNHRPPLSLPLCSGAHVLEFLHYLDQFGKTKVHNPTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAETNPFGARAVRIYLRDVRDFQSKARGVSYEKKRKRPKPKTSSSSSDASATHA* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1124 184 Pfam ALOG domain 32 151 IPR006936 -
Ahy16g1124 184 PANTHER PROTEIN G1-LIKE5 17 180 - -
Ahy16g1124 184 MobiDBLite consensus disorder prediction 17 41 - -
Ahy16g1124 184 PANTHER PROTEIN G1-LIKE2 17 180 IPR040222 -
Ahy16g1124 184 MobiDBLite consensus disorder prediction 157 184 - -
Ahy16g1124 184 MobiDBLite consensus disorder prediction 17 38 - -
Ahy16g1124 184 ProSiteProfiles ALOG domain profile. 38 165 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1124 Ahy-Chr16 20364119 20365301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1124 - - gmx:100791424 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1124 16 20364119 20365301 Ahy6g0276 6 3416701 3417780 hybridization
Ahy16g1124 16 20364119 20365301 Ahy12g0935 12 19033437 19035456 PCT
Ahy16g1124 16 20364119 20365301 Ahy2g0797 2 14720959 14723158 PCT