Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0910 ATGACTTCTCTGAGCAGAGAATTGGTGTTTCTCATACTCCAATTTCTGGAGGAGGAAAAGTTCAAAGAGTCGGTGCACAAGCTTGAGAAAGAGTCGGGGTTTTTCTTCAACATGAAATACTTTGAGGAAAAAGTACAGGCTGGCGAATGGGAAGAAGTTGAGAAGTATTTGGCAGGGTTTACAAAAGTTGATGATAATAGATACTCCATGAAAATATTCTTTGAAATCAGGAAGCAGAAATATCTTGAAGCCCTTGATAGGCAAGACAAGGCAAAGGCTGTTGAGATATTAGTGGGTGATTTAAAAGTGTTCTCCACCTTCAATGAGGAACTATACAAAGAAATTACGCAGCTGTTAACGCTTAATAATTTCAGGGAGAATGAGCAGCTGTCCAAGTATGGTGACACCAAAACTGCGCGCGGGATCATGTTGATTGAGCTTAAAAAGCTGATAGAAGCAAATCCACTTTTCCGTGATAAGCTTATCTTCCCTACACTTAAATCATCAAGATTGCGGACCTTAATTAATCAAAGTCTGAATTGGCAGCACCAGCTTTGCAAAAACCCCAGGCCAAACCCAGATATAAAGACACTATTCACTGATCACACATGTACTCCTCCTAATGGTCCTCTAGCACCTGCACCTGTCAATCTTCCAGTTGCTGCTGTTGCAAAGCCTGCTGCCTATACTTCACTTGGAGCACATGGTCCATTTCCGCCTGCTGCAGCAACTGCTAATGCAAATGCTTTGGCTGGTTGGATGGCTAATGCGTCAGCTTCATCATCTGTCCAAGCAGCTGTTGTGACGGCATCAAGCATGCCACTCCCACAGAATCAAGTGTCTATCTTGAAGAGGCCGAGGACACCTCCAACAGCTCCTGGCATGGTTGATTATCAGAATGCTGCCGATCATGACCAGCTAATGAAAAGACTTCGGCCTGCTCCTTCTCTAGAGGAGGTTTCCTATCCGACAGCCCGACAAGCTTCTTGGTCACTGGAAGATCTACCAAGAACAGTGGCTATGACTTTACATCAAGGCTCCTCTGTGACAAGCATGGACTTTCATCCTTCTCACCAAACCTTACTTCTTGTTGGATCTAACAATGGTGAAATTGCCCTCTGGGAACTTACTTTGCGAGATAGATTGGTTACAAAGCCATTCAAGATATGGGATATCTCAGCATGTTCATTACCATTTCAGGCTGCTGCGGTCAAAGATGCCCCTATTTCTGTCAGCCGTGTTACATGGAGCCCTGATGGAAGTTTTGTGGGTGTCGCATTTACTAAACATTTGATTCACTTGTATGCCTACACTGGTTCAAATGAGCTAACTCAGCGCATAGAGGTTGATGCCCACATTGGTGGTGTGAACGACTTGGCATTTGCTCATCCCAATAAGCAACTTTGCATTGTGACTTGTGGGGATGATAAGTTGATAAAGGTGTGGGATTTAACTGGGCGAAGACTATTTAACTTTGAGGGGCATGATGCACCTGTATATTCCATTTGTCCTCACCACAAGGAGAACATACAGTTCATATTTTCAACTGCCATCGATGGCAAAATAAAAGCCTGGCTATATGATAACATGGGTTCCAGGGTTGACTATGATGCCCCTGGTCACTGGTGTACTACAATGCTTTATAGTGCTGATGGGAGTAGACTGTTTTCTTGTGGGACAAGTAAAGATGGAGAGTCATACCTTGTTGAGTGGAATGAAAGCGAAGGAGCCATCAAGAGAACATACAATGGTTTCAGAAAGAAATCTGCTGGTGTTGTGCAGTTTGACACAACTCAAAATCGATTCTTAGCTGCTGGAGAAGAAGGTCAAATCAAGTTTTGGGACATGGACAATATTAATGTTATTACTAGCACTGATGCTGATGGTGGACTTCAGGGCCTTCCACGCCTGAGATTCAACAAGGAAGGAAATCTTCTTGCTGTTACTACTGCAGACAATGGATTCAAAATTCTTGCCAATGCTAGTGGTCTTAGATCTTTAAGAACGATTGAAACTCCAGCTTTTGAAGCATTGAGATCACCCATTGAATCTGCAGCAATCAAGGCATCCGGCTCTGCTGCTGTTAACGTTAGTCCTGTCAACTGTAAAGTGGAAAGGAGCTCCCCTGTCAGGCCTTCTCCAATTCTTAATGGAGTTGATCCCGCAGGTCGAAATGTTGAGAAACCAAGAATTGTGGAAGATGCAATTGATAGAACTAAACCATGGCAGCTGTCTGAAATTCTGGATCCAGTCCAGTGTCGGTTAGTAACCATGCCTGACAGCACAGATTCTTCCAGCAAGGTTGTTCGACTTCTATATACAAACTCTGGTGCTGGTCTCTTGGCACTTGGTTCAAATGGTGTTCAGAAGCTGTGGAAATGGACACGCGGCGAACAGAATCCCACTGGGAAGGCAACTGCCAGTGTTGTTCCACAACATTGGCAACCCAACAGTGGTCTTCTTATGACCAACGATATCTCAGGTGTCAATCTTGAAGAAGCAGTTCCTTGCATTGCACTCTCAAAGAATGATTCATATGTTATGTCTGCCTGTGGTGGGAAGGTTTCATTATTCAACATGATGACGTTCAAGGTAATGACAACATTCATGCCACCACCTCCTGCCTCTACTTTTCTGGCTTTCCATCCTCAGGATAACAACATAATTGCCATCGGAATGGAGGATTCTACCATTCATATTTATAATGTCAGAGTTGATGAGGTGAAATCAAAATTGAAGGGACACCAGAAACGTATTACTGGTTTAGCCTTCTCAACAAATCTCAACATCCTTGTTTCATCAGCTGCTGATGCTCATCTTAGCGTGTGGAGCATTGATACATGGGAGAAAAGAAAATCGGTTCCAATACAGCTACCTGCTGGAAAGGCGCCCACTGGTGACACTAGAGTGCAGTTTCATTCTGACCAACTACGCTTATTGGTAGCCCATGAGACTCAATTGGCAATATATGACGCCTCTAAGATGGAACGCATTCGGCAGTGGGTTCCACAAGATGTTCTTCCTGCTCCTATATCATATGCAGCTTATTCCTGCAACAGTCAGTTAATTTACGCTACATTCTGTGATGGCAATACTGGAGTTTTTGATGCGGATAGCTTGAGACTACGATGTCGTATTGCACTATCAACATATGTGCAATCAGCAACTTTAAGTGGAAGCCAATCTCTGTATCCTGTTGTTGTCGCCGCGCATCCAATAGAGGCGAACCAATTCGCGGTTGGATTGACAGATGGGTCTGTGAAAGTAATAGAGCCCAGTGAATCAGAGGGTAAATGGGGAACTAGTCCACCCATTGATAATGGAATATTGAACGGTAGAGCAGCATCTTCTTCTACAACAAGCAACCACACACCCGAGCAGGCACAACGATAA 3393 0.4397 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLAGFTKVDDNRYSMKIFFEIRKQKYLEALDRQDKAKAVEILVGDLKVFSTFNEELYKEITQLLTLNNFRENEQLSKYGDTKTARGIMLIELKKLIEANPLFRDKLIFPTLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHTCTPPNGPLAPAPVNLPVAAVAKPAAYTSLGAHGPFPPAAATANANALAGWMANASASSSVQAAVVTASSMPLPQNQVSILKRPRTPPTAPGMVDYQNAADHDQLMKRLRPAPSLEEVSYPTARQASWSLEDLPRTVAMTLHQGSSVTSMDFHPSHQTLLLVGSNNGEIALWELTLRDRLVTKPFKIWDISACSLPFQAAAVKDAPISVSRVTWSPDGSFVGVAFTKHLIHLYAYTGSNELTQRIEVDAHIGGVNDLAFAHPNKQLCIVTCGDDKLIKVWDLTGRRLFNFEGHDAPVYSICPHHKENIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGSRLFSCGTSKDGESYLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEEGQIKFWDMDNINVITSTDADGGLQGLPRLRFNKEGNLLAVTTADNGFKILANASGLRSLRTIETPAFEALRSPIESAAIKASGSAAVNVSPVNCKVERSSPVRPSPILNGVDPAGRNVEKPRIVEDAIDRTKPWQLSEILDPVQCRLVTMPDSTDSSSKVVRLLYTNSGAGLLALGSNGVQKLWKWTRGEQNPTGKATASVVPQHWQPNSGLLMTNDISGVNLEEAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTNLNILVSSAADAHLSVWSIDTWEKRKSVPIQLPAGKAPTGDTRVQFHSDQLRLLVAHETQLAIYDASKMERIRQWVPQDVLPAPISYAAYSCNSQLIYATFCDGNTGVFDADSLRLRCRIALSTYVQSATLSGSQSLYPVVVAAHPIEANQFAVGLTDGSVKVIEPSESEGKWGTSPPIDNGILNGRAASSSTTSNHTPEQAQR* 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0910 1130 Pfam WD domain, G-beta repeat 449 483 IPR001680 GO:0005515
Ahy16g0910 1130 Pfam WD domain, G-beta repeat 911 944 IPR001680 GO:0005515
Ahy16g0910 1130 ProSiteProfiles Trp-Asp (WD) repeats profile. 912 953 IPR001680 GO:0005515
Ahy16g0910 1130 Gene3D - 759 1101 IPR015943 GO:0005515
Ahy16g0910 1130 SUPERFAMILY WD40 repeat-like 767 1090 IPR036322 GO:0005515
Ahy16g0910 1130 MobiDBLite consensus disorder prediction 1111 1130 - -
Ahy16g0910 1130 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Ahy16g0910 1130 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Ahy16g0910 1130 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 414 949 IPR011047 -
Ahy16g0910 1130 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1130 IPR027728 GO:0006355
Ahy16g0910 1130 SMART ctlh 34 92 IPR006595 -
Ahy16g0910 1130 Gene3D - 409 672 IPR015943 GO:0005515
Ahy16g0910 1130 ProSiteProfiles Trp-Asp (WD) repeats profile. 449 484 IPR001680 GO:0005515
Ahy16g0910 1130 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 338 439 IPR011044 -
Ahy16g0910 1130 MobiDBLite consensus disorder prediction 1093 1130 - -
Ahy16g0910 1130 SMART WD40_4 1000 1036 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 529 572 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 440 483 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 905 944 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 823 859 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 1050 1091 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 485 526 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 336 375 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 575 615 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 398 436 IPR001680 GO:0005515
Ahy16g0910 1130 SMART WD40_4 862 902 IPR001680 GO:0005515
Ahy16g0910 1130 ProSitePatterns Trp-Asp (WD) repeats signature. 470 484 IPR019775 -
Ahy16g0910 1130 ProSiteProfiles Trp-Asp (WD) repeats profile. 342 384 IPR001680 GO:0005515
Ahy16g0910 1130 SMART Lish 4 36 IPR006594 GO:0005515
Ahy16g0910 1130 Gene3D - 329 388 IPR015943 GO:0005515
Ahy16g0910 1130 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 912 947 - -
Ahy16g0910 1130 PANTHER PROTEIN, PUTATIVE-RELATED 1 1130 - -
Ahy16g0910 1130 ProSiteProfiles Trp-Asp (WD) repeats profile. 593 624 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0910 Ahy-Chr16 16301365 16309481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0910 - - gmx:100793575 2031.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0910 16 16301365 16309481 Ahy16g0910 16 16301365 16309481 ECH
Ahy16g0910 16 16301365 16309481 Ahy6g0454 6 5537724 5545897 hybridization