Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0896 ATGGTCACATTCATGATGGCCCTCGTAGCGATAATAATGGGTCTCTTATTGTTTCAGTCGTCTTTTGCGGAAGAAGACGACGCCTTTGTGCTCACACAGGACACCTTCGAAAACGAGGTTGGCCATGATCGCGGCGTTCTCATCAAGTTCTACGCTCCCTGGTGTGGCCACTGTAAAAAGCTTGTACCGGAGTATGAAAAGCTCGCAGCAACTTTCAAGAAAACCAAGTCCGTTTTGATCGCCAAAGTAGATTGTGATGCAGATAAAAGCATTTGCTCTAAATATGGGGTTTCTGTTTACCCTACAATTAAGTGGTTTCCTCAGGGTTCTTTAGAACCTATGTTATATGAAGGTGCAAAAACCGCAGAAGCCCTTGTTGGATTTGTGAACATGAAAGGAGGTACCAATGTAAAGATAGCAACAACTCCATCTGATGTGGTGCCTCTCACCTTATTTAACTTTGATAAGATTGTCTTGGATAAAACAAAACATGTTCTTGTTGAGTTCTATGCACCCTGGTGCAAACATTGCAAGGCCTTTGCCCCTACTTATGAAAAGGTTGCTACAGCATTTAAACCAGAAGAAGATGTAGTTATAGCTAGTATTGATGGTGACATGTACAAGGATGTAACTACAAAATATGAAATTACTAGTTATCCCAAACTGAAATTGTTCAGAAAGAGCAATAAAGCTGGTGAAGTTTATGAAGGTGCTCGTAATTTGGATGATATTGTATCTTACATCAATGAGAAATGTGGCACAAATCGCGATGGACAAGGAAGACTTACTTCTAAAGCTGGTATAGTAGCATCCCTGGATAAGTTGGTGAAGAAATTTGTGAATGCAGGTGACAATGACAAAAAGGCCATCTATTCACAACTTGAAGAGGAAGTTGAGGATCTTGAAGGATCTGATGCAAGATATGGCAAATTGTACTTAAAACTTGCTAAGAACTGTATGGAAAAGGGTAAAGAGTATGCAAAGAACGAGGTTCAACGTCTTGAGAGAATGCTTGAAAAGTCAATAAACCCAACCAAGACAGATGAATTCACTCTCAAGAAGAACATCTTATCTTTATTTGCTTAA 1086 0.3969 MVTFMMALVAIIMGLLLFQSSFAEEDDAFVLTQDTFENEVGHDRGVLIKFYAPWCGHCKKLVPEYEKLAATFKKTKSVLIAKVDCDADKSICSKYGVSVYPTIKWFPQGSLEPMLYEGAKTAEALVGFVNMKGGTNVKIATTPSDVVPLTLFNFDKIVLDKTKHVLVEFYAPWCKHCKAFAPTYEKVATAFKPEEDVVIASIDGDMYKDVTTKYEITSYPKLKLFRKSNKAGEVYEGARNLDDIVSYINEKCGTNRDGQGRLTSKAGIVASLDKLVKKFVNAGDNDKKAIYSQLEEEVEDLEGSDARYGKLYLKLAKNCMEKGKEYAKNEVQRLERMLEKSINPTKTDEFTLKKNILSLFA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0896 361 ProSiteProfiles Thioredoxin domain profile. 20 134 IPR013766 -
Ahy16g0896 361 PANTHER BNAC04G51940D PROTEIN 6 360 - -
Ahy16g0896 361 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 6 360 - -
Ahy16g0896 361 SUPERFAMILY Thioredoxin-like 143 254 IPR036249 -
Ahy16g0896 361 Gene3D - 266 361 IPR036356 -
Ahy16g0896 361 SUPERFAMILY Thioredoxin-like 22 130 IPR036249 -
Ahy16g0896 361 CDD PDI_a_ERp38 30 129 - -
Ahy16g0896 361 Pfam Thioredoxin 146 249 IPR013766 -
Ahy16g0896 361 Pfam Thioredoxin 29 129 IPR013766 -
Ahy16g0896 361 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 267 360 IPR011679 GO:0005783
Ahy16g0896 361 ProSitePatterns Thioredoxin family active site. 47 65 IPR017937 -
Ahy16g0896 361 Gene3D Glutaredoxin 138 265 - -
Ahy16g0896 361 PRINTS Thioredoxin family signature 54 63 - -
Ahy16g0896 361 PRINTS Thioredoxin family signature 96 107 - -
Ahy16g0896 361 PRINTS Thioredoxin family signature 46 54 - -
Ahy16g0896 361 ProSiteProfiles Thioredoxin domain profile. 136 253 IPR013766 -
Ahy16g0896 361 CDD ERp29c 269 360 IPR011679 GO:0005783
Ahy16g0896 361 SUPERFAMILY ERP29 C domain-like 266 360 IPR036356 -
Ahy16g0896 361 TIGRFAM pdi_dom: protein disulfide-isomerase domain 31 131 IPR005788 GO:0003756
Ahy16g0896 361 TIGRFAM pdi_dom: protein disulfide-isomerase domain 152 251 IPR005788 GO:0003756
Ahy16g0896 361 Gene3D Glutaredoxin 19 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0896 Ahy-Chr16 16045748 16048063 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0896 K09584 - gmx:100037472 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0896 16 16045748 16048063 Ahy16g0896 16 16045748 16048063 ECH
Ahy16g0896 16 16045748 16048063 Ahy6g0467 6 5743580 5745767 hybridization