Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy16g0874 | ATGGCTATTGCCTTTCCAATTCAGCGCTTCTACGATATTCCCATCTCTCTCTCCACCTGTTCCCCTCGCTGCATTTCAGGCCACTCTCAGGCTAAAGGTTTTGCAGTTCCACGGAGGAAAGCATTGTCCTTGTCCTTGTCCTTGCTCCTACCAACTTACATTCTCTCTGGCTCTGCTGCATTGGCTCAGCACTCCCCTGTGCTGCGCGAATACGTAGACTCATTTGATGGCTATTCATTCAGGTACCCCAGCAACTGGATCCAAGTGCGTGGTGCCGGTGCTGACATCTTCTTCAGAGACCCTTATGTTCTCGATGAAAACATATCTGTTGAGATCTCCTCTCCATCATCTTCCAGATACAAGACTGTTCAGGACTTGGGTTCACCCCAAGAAGCCGGCAAAAAGGTTCTCAGGCAATATCTCACTGAATTCATGTCTACGAGGCTTGGTGTTAGACGCGAATCCAACATCCTTTCCACCTCTTCCAGAGTTGCCGATGATGGCAAGTTGTACTATCAAGTTGAGGTAAACATCAAGTCATATGCAAACAACAATGAGCTTGCTGTTATGCCACAAGAGCGGGTGGTACGCATGGAATGGGATCGGAGGTATCTTTCAGTACTTGGAGTTGAAAACAATCAACTCTATGAGTTGAGATTGCAAGTGCCAGAGAATGTCTTTACAGAGGAACAAAATGATCTTCGTCAAGTCATGGATTCTTTTCGTGTCAACAAGATTGCTGCTTAG | 747 | 0.4659 | MAIAFPIQRFYDIPISLSTCSPRCISGHSQAKGFAVPRRKALSLSLSLLLPTYILSGSAALAQHSPVLREYVDSFDGYSFRYPSNWIQVRGAGADIFFRDPYVLDENISVEISSPSSSRYKTVQDLGSPQEAGKKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQERVVRMEWDRRYLSVLGVENNQLYELRLQVPENVFTEEQNDLRQVMDSFRVNKIAA* | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy16g0874 | 248 | SUPERFAMILY | Mog1p/PsbP-like | 69 | 243 | IPR016123 | - | |
| Ahy16g0874 | 248 | Gene3D | Mog1/PsbP, alpha/beta/alpha sandwich | 63 | 243 | - | - | |
| Ahy16g0874 | 248 | PANTHER | - | 28 | 247 | - | - | |
| Ahy16g0874 | 248 | PANTHER | PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC | 28 | 247 | - | - | |
| Ahy16g0874 | 248 | Pfam | PsbP | 68 | 243 | IPR002683 | GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy16g0874 | Ahy-Chr16 | 15668348 | 15669912 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy16g0874 | - | - | adu:107473109 | 362.459 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy16g0874 | 16 | 15668348 | 15669912 | Ahy16g0874 | 16 | 15668348 | 15669912 | ECH | |
| Ahy16g0874 | 16 | 15668348 | 15669912 | Ahy6g0485 | 6 | 5925967 | 5927227 | hybridization |