Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0865 ATGGGGTCCGAAGGTCCTCCATCAGCAAAGATAACAACAATTCATGTGACAGGATTTAAAAAGTTCCATGGAGTTTCAGATAATCCAACAGAAACAATTGTCAATAATTTGACAGAATATATGAACAAGAAGACTTTGCCAAAATGTTTAACTATTGGGAGCTGCACCATTCTTGAGACCGCAGGTGAAGGAGCACTTGTTCCACTCTACCAGACTTTACAATCTGCCCTTATTGTTCCACAAGACTCTCAATCTGAATCTTCAAATTCCAACCGAATTATTTGGCTTCATTTTGGGGTTAATAGTGGTGCAACAAGGTTTGCTATAGAGAAGCAAGCTTTCAATGAAGCTAATTTCCGTTGCCCTGATGAAATGGGATGGAAGCCCCAGAGAGTCCCAATTGTTCCTTCAGATGGTGAAATTTCACAAACCCGTCAGACTTCGCTTCCTGTTGTGGAGATCACCGAGGCATTGGCACAGAAGGAATATGATGTTATGGTATCGGATGATGCAGGCAGGTTTGTATGCAATTACGTTTACTACCATTCCCTTCGTTTTGCAGAGCAGAAGGGGATTAAATCTCTTTTTGTTCATGTGCCACTCTTCTCAACAATAAATGAAGAAATTCAAATGCAATTTGCTTCTTCCTTGTTAGAGGTACTTGCTTCTATATGTTAA 678 0.4027 MGSEGPPSAKITTIHVTGFKKFHGVSDNPTETIVNNLTEYMNKKTLPKCLTIGSCTILETAGEGALVPLYQTLQSALIVPQDSQSESSNSNRIIWLHFGVNSGATRFAIEKQAFNEANFRCPDEMGWKPQRVPIVPSDGEISQTRQTSLPVVEITEALAQKEYDVMVSDDAGRFVCNYVYYHSLRFAEQKGIKSLFVHVPLFSTINEEIQMQFASSLLEVLASIC* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0865 225 PIRSF Pyrrolidone-crbxlat_pptds 11 225 IPR000816 GO:0005829|GO:0006508|GO:0016920
Ahy16g0865 225 CDD Peptidase_C15 13 223 IPR000816 GO:0005829|GO:0006508|GO:0016920
Ahy16g0865 225 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 13 222 IPR036440 -
Ahy16g0865 225 Gene3D - 10 224 IPR036440 -
Ahy16g0865 225 PANTHER BNAA09G15240D PROTEIN 1 224 - -
Ahy16g0865 225 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 224 IPR016125 -
Ahy16g0865 225 Pfam Pyroglutamyl peptidase 93 202 IPR016125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0865 Ahy-Chr16 15506866 15510417 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0865 K01304 - gmx:100789152 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0865 16 15506866 15510417 Ahy16g0865 16 15506866 15510417 ECH
Ahy16g0865 16 15506866 15510417 Ahy6g0491 6 5992535 5995780 hybridization
Ahy16g0865 16 15506866 15510417 Ahy19g1353 19 28818162 28821184 PCT
Ahy16g0865 16 15506866 15510417 Ahy9g1071 9 22519009 22522140 PCT
Ahy19g1353 19 28818162 28821184 Ahy16g0865 16 15506866 15510417 PCT
Ahy9g1071 9 22519009 22522140 Ahy16g0865 16 15506866 15510417 PCT