Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0860 ATGGCTAGGAAGAAGATCAGAGAGTACCAATCCAAGAGGCTCCTCAAGGATCACCTAAGCCGACTCGCTTCCATTAACCTCGAAATTCAATCTGCTCAGGTGACTGAGTCCACGGACTTCACTGAGTTGACTAACCAACACCCATGGCTTTCCTCTACAAAATTGGTGGTCAAGCCTGACATGCTCTTCGGCAAGCGCGGTAAGAGTGGCCTCGTCGCTCTCAATTTGGACATTGCTCAAGTCGCCGATTTTGTCAAAGCACGCCTCGGCGTTGAGGTTGACATCGCTGGTTGCAAGGCACCTATCACCACTTTCATTGTTGAACCCTTTGTTCCACACGATCAAGAATTCTATCTCTCCATTGTTTCCGAACGCCTCGGCTCTGCCATCAGCTTCTCTGATTCTGGCGGCATCGAAATTGAGGAGAACTGGGATAAGGTTAAGACTATATTCCTTCCAACAGAGAAACCTATGACTCCGGAGGCCTGTGCGCCGCTGATTGCTACACTTCCTTTGGAGATTCGGGGCACAATTGGCAAATTCATAATCGGTGTGTTTGCTGTCTTTCAAGACTTGGACTTCAGTTTCCTAGAGATGAATCCATTTACACTGGTGAATGACAAGCCATATCCACTGGATATGAGAGGGGAATTGGATGACACTGCTGCATTCAAGAACTTCAACAAGTGGGGTAATATAGAGTTTCCATTGCCTTTTGGAAGAGTTCTGAGCCCCACAGAAAGCTTCATTCATTCCTTGGATGAGAAGACAAGTGCATCTTTGAAGTTTACTATATTGAACCCAAAAGGACGCATTTGGACAATGGTAGCTGGAGGCGGTGCAAGTGTTATATATGCCGATACTGTTGGAGATTTAGGTTACGCATCAGAGCTTGGAAACTATGCTGAGTATAGTGGAGCTCCAAATGAGGAGGAGGTGTTACAGTATGCAAGAGTTGTAATTGATTGTGCCACTGCTGAGCCCGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATTGCAAACTTCACTGATGTTGCCGCCACGTTTAGTGGGATTATTCGAGCCCTAAAAGAGAAGGAAACAAAGCTTAAAGCTGCAAGAATGCACATTTATGTCAGAAGAGGAGGTCCAAATTATCAGGCTGGTTTAGCGAAGATGCGTGCACTGGGGGAGGAACTGGGACTACCGATTCAGGTTTATGGACCAGAGGCTACAATGACTGGCATATGTAAACAGGCTATTGATTGCATAATGTCTGAAGCATAA 1272 0.4638 MARKKIREYQSKRLLKDHLSRLASINLEIQSAQVTESTDFTELTNQHPWLSSTKLVVKPDMLFGKRGKSGLVALNLDIAQVADFVKARLGVEVDIAGCKAPITTFIVEPFVPHDQEFYLSIVSERLGSAISFSDSGGIEIEENWDKVKTIFLPTEKPMTPEACAPLIATLPLEIRGTIGKFIIGVFAVFQDLDFSFLEMNPFTLVNDKPYPLDMRGELDDTAAFKNFNKWGNIEFPLPFGRVLSPTESFIHSLDEKTSASLKFTILNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAEPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKETKLKAARMHIYVRRGGPNYQAGLAKMRALGEELGLPIQVYGPEATMTGICKQAIDCIMSEA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0860 423 PANTHER ATP-CITRATE SYNTHASE 1 423 - -
Ahy16g0860 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Ahy16g0860 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Ahy16g0860 423 Gene3D - 1 233 - -
Ahy16g0860 423 Pfam ATP-grasp domain 5 203 IPR013650 -
Ahy16g0860 423 Gene3D - 240 422 IPR016102 -
Ahy16g0860 423 SUPERFAMILY Succinyl-CoA synthetase domains 257 403 IPR016102 -
Ahy16g0860 423 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0860 Ahy-Chr16 15362576 15366230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0860 1 420 Acyl Lipid Metabolism Gene Families AT1G09430 87.143 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0860 K01648 - gmx:100787551 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0860 16 15362576 15366230 Ahy6g0496 6 6022942 6026605 hybridization