Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0770 ATGGCCACCGAGACCTTCCTTTTCACTTCCGAATCTGTCAACGAGGGTCACCCTGACAAGCTCTGCGACCAGGTCTCTGATGCAGTTCTCGATGCCTGCCTCCAGCAGGATCCCGATAGTAAGGTTGCCTGTGAGACCTGCACCAAGACTAACATGGTCATGGTGTTTGGAGAAATAACAACCAAGGCCAATGTAGACTATGAGAAGATTGTCCGTGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTCGGTCTTGATGCTGACAAATGCAAGGTCTTGGTCAACATTGAGCAGCAGAGCCCCGATATTGCACAGGGTGTCCATGGCCACTTTACCAAGCGCCCAGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGTTATGCCACTGATGAAACCCCGGAACTCATGCCTCTCAGCCATGTCCTTGCAACAAAACTTGGCGCCCGCCTCACCGAGGTTAGGAAGAATGGTACATGTGCTTGGCTGAGACCAGATGGTAAGACTCAAGTAACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTTCGCGTCCACACTGTCCTTATTTCCACCCAGCATGATGAGACTGTTACCAATGACCAAATTGCTGCTGATCTTAAGGAGCATGTTATCAAGCCTGTCATTCCTGAGAAGTACCTTGATGACAGGACCATCTTCCACCTTAACCCTTCTGGCCGCTTTGTCATTGGTGGCCCTCATGGTGATGCCGGTCTCACTGGAAGAAAGATCATCATTGATACTTATGGTGGCTGGGGTGCTCATGGTGGTGGTGCTTTCTCTGGAAAGGACCCTACCAAGGTCGACAGAAGCGGTGCCTATATCGTAAGGCAGGCAGCAAAGAGTATTGTGGCTAGCGGTCTTGCCCGCAGGTGTCTTGTTCAGGTTTCCTATGCCATTGGTGTCCCTGAGCCCTTGTCAGTCTTTGTTGAGTCTTATGGAACTGGGAAGATCCCTGACAAGGAGATCCTTCAAATTGTGAAGGAGAACTTCGACTTCAGGCCCGGAATGATCACCATTAACTTGGACCTCAAGAGGGGTGGCAACAGGTTCTTGAAGACAGCTGCTTATGGACACTTCGGAAGGGATGACGCCGATTTCACCTGGGAAATTGTGAAGCCACTCAAGTGGGACAAGCCTCAAGCATGA 1185 0.5055 MATETFLFTSESVNEGHPDKLCDQVSDAVLDACLQQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDDRTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCLVQVSYAIGVPEPLSVFVESYGTGKIPDKEILQIVKENFDFRPGMITINLDLKRGGNRFLKTAAYGHFGRDDADFTWEIVKPLKWDKPQA* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0770 394 Pfam S-adenosylmethionine synthetase, central domain 119 240 IPR022629 GO:0004478|GO:0006556
Ahy16g0770 394 Gene3D - 13 281 - -
Ahy16g0770 394 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 3 393 - -
Ahy16g0770 394 CDD S-AdoMet_synt 7 382 - -
Ahy16g0770 394 Gene3D - 6 244 - -
Ahy16g0770 394 ProSitePatterns S-adenosylmethionine synthase signature 2. 268 276 IPR022631 GO:0004478|GO:0006556
Ahy16g0770 394 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Ahy16g0770 394 TIGRFAM metK: methionine adenosyltransferase 7 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Ahy16g0770 394 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 3 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Ahy16g0770 394 SUPERFAMILY S-adenosylmethionine synthetase 242 389 IPR022636 GO:0004478|GO:0006556
Ahy16g0770 394 Pfam S-adenosylmethionine synthetase, C-terminal domain 242 382 IPR022630 GO:0004478|GO:0006556
Ahy16g0770 394 Hamap S-adenosylmethionine synthase [metK]. 4 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Ahy16g0770 394 SUPERFAMILY S-adenosylmethionine synthetase 117 241 IPR022636 GO:0004478|GO:0006556
Ahy16g0770 394 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Ahy16g0770 394 Gene3D - 119 382 - -
Ahy16g0770 394 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Ahy16g0770 394 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0770 Ahy-Chr16 13929909 13932295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0770 K00789 - gmx:100812341 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0770 16 13929909 13932295 Ahy16g0770 16 13929909 13932295 ECH
Ahy11g2114 11 132765806 132767809 Ahy16g0770 16 13929909 13932295 ECH
Ahy16g0770 16 13929909 13932295 Ahy6g0565 6 6899721 6902049 hybridization