Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0756 ATGTCTAAACAAAGGTTGGAAGGCAAGGTGGCAATAGTGACCGGAGGAGCAAGTGGAATAGGAGCAGAAGCAGTGAGGGTATTTGTGGAAAACGGTGCGTTTGTAGTTGTAGCAGATGTTCAAGACGAGCTCGGTCACCACCTTGCAAGTTCCATTGGCTTGTTAGAGAAGGTGAGTTACCGCCACTGCGACATCAGAGACGAGAAACAAGTTGAAGAAACCGTGGCTTTCGCGGTGGAGAAATACGGAAGCCTAGACATCATGTTCAGCAACGCTGGAATTGCAGGCTCTATCTCTAACATACTTGATTTAGATCTGAACGATTTTGACAACGCCATGGCTGTGAATCTTCGCGGAGCAGCAGCGTGCATCAAGCATGCTGCACGTGTCATGGTGGCAAGAAGGACACGTGGATCCATAATATGCACAGGGAGTGTGGTTGCTTCGGTTGGTATTGGCGCAGCTGCTGGTGTTAGTTATACTGCATCCAAACACGGCCTTATAGGACTTGTGCGTTCGGCGTGTGGTGAGCTTGGCCGTTACGGGATCAGAGTGAATTCGGTTTCACCATATGTTGTGGCCACGCCTCTTGTGTGTAGAGCGCTGAATGTGGAGGCAAGTGAAGTTGAAAGTGCTGGTGGTGTTGGTACCAGTTTGCGGGGGATTGTGTTGAAGCCAATACATGTTGCGGAAGCAGCTTTGTTTCTTGCTTCTGATGAATCTGCTTACATTAGTGGACATGATTTGACCGTTGACGGAGGTTTCTTGGCCGTTAATCGCGGTATTGAACTCTCCCTAGCTAGCTTCAAAACTAAATGA 819 0.4872 MSKQRLEGKVAIVTGGASGIGAEAVRVFVENGAFVVVADVQDELGHHLASSIGLLEKVSYRHCDIRDEKQVEETVAFAVEKYGSLDIMFSNAGIAGSISNILDLDLNDFDNAMAVNLRGAAACIKHAARVMVARRTRGSIICTGSVVASVGIGAAAGVSYTASKHGLIGLVRSACGELGRYGIRVNSVSPYVVATPLVCRALNVEASEVESAGGVGTSLRGIVLKPIHVAEAALFLASDESAYISGHDLTVDGGFLAVNRGIELSLASFKTK* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0756 272 PRINTS Glucose/ribitol dehydrogenase family signature 132 148 IPR002347 -
Ahy16g0756 272 PRINTS Glucose/ribitol dehydrogenase family signature 160 179 IPR002347 -
Ahy16g0756 272 PRINTS Glucose/ribitol dehydrogenase family signature 181 198 IPR002347 -
Ahy16g0756 272 PRINTS Glucose/ribitol dehydrogenase family signature 219 239 IPR002347 -
Ahy16g0756 272 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Ahy16g0756 272 PRINTS Glucose/ribitol dehydrogenase family signature 83 94 IPR002347 -
Ahy16g0756 272 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 147 175 IPR020904 GO:0016491
Ahy16g0756 272 PANTHER OXIDOREDUCTASE-RELATED 1 262 - -
Ahy16g0756 272 Gene3D - 1 268 - -
Ahy16g0756 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 257 IPR036291 -
Ahy16g0756 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 IPR002347 -
Ahy16g0756 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 IPR002347 -
Ahy16g0756 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 IPR002347 -
Ahy16g0756 272 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 262 - -
Ahy16g0756 272 Pfam Enoyl-(Acyl carrier protein) reductase 15 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0756 Ahy-Chr16 13774616 13775789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0756 6 254 Acyl Lipid Metabolism Gene Families AT3G55290 28.571 1.45e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0756 - - gmx:100798299 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0756 16 13774616 13775789 Ahy6g0583 6 7093881 7095022 hybridization