Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0742 ATGGCGGCAGTAACAGTTACAGGCACGGCGCTGCCGAAGACACCATCGGCGTCTTCAATCAGGAGTTTCAGTGGTGAAAGGTTTTCGGTTCTGATATTTTGGAAGAACAAGAGAAGAATCTCACTGACCTGTTCTGCATCCAACAACACAAGCTCTTCTTCATCTTCATCTTCTGGATTGTACTCTGCTCAGAAATATGAACTGACGGCAGCAAACGTGGACATGGTTCTAGAGGACGTTCGGCCTTACCTGATTTCTGACGGCGGCAACGTGGAAGTGGTTTCTGTGGAAGACGGCGTCATATCTCTCAGACTCCAAGGAGCATGCGAGTCTTGTCCCAGCTCAACCACCACCATGAAGATGGGAATCGAACGCGTCCTCAAAGAAAAATTCGGAGACTCCGTCAAAGAAATTCAGCAACTATACGATGCTGAACCCAAGGAAACCACCATTGAGGCGGTGAATAATCATCTTGAGATATTGAGACCTGCCATTAAGAACTACGGAGGAAGCGTGGAAGTGGTTTCCATTGAAGGCGGTGAGTGCGTTGTGAAGTATATTGGACCTGACTCCATTGCTTCTGGCATCAAAGCTGCCATCAAGGAGAGGTTCCCTGACATTCTCAATGTCACCTTCCAAGCCTGGGATTCCCATCAGTAA 660 0.4818 MAAVTVTGTALPKTPSASSIRSFSGERFSVLIFWKNKRRISLTCSASNNTSSSSSSSSGLYSAQKYELTAANVDMVLEDVRPYLISDGGNVEVVSVEDGVISLRLQGACESCPSSTTTMKMGIERVLKEKFGDSVKEIQQLYDAEPKETTIEAVNNHLEILRPAIKNYGGSVEVVSIEGGECVVKYIGPDSIASGIKAAIKERFPDILNVTFQAWDSHQ* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0742 219 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 71 135 IPR034904 -
Ahy16g0742 219 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 148 212 IPR034904 -
Ahy16g0742 219 Gene3D - 150 212 IPR034904 -
Ahy16g0742 219 Gene3D - 65 149 IPR034904 -
Ahy16g0742 219 Pfam NifU-like domain 73 133 IPR001075 GO:0005506|GO:0016226|GO:0051536
Ahy16g0742 219 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 45 212 - -
Ahy16g0742 219 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 45 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0742 Ahy-Chr16 13456201 13457294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0742 K22074 - gmx:100527356 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0742 16 13456201 13457294 Ahy16g0742 16 13456201 13457294 ECH
Ahy16g0742 16 13456201 13457294 Ahy6g0596 6 7354143 7355244 hybridization