Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0719 ATGGAGGATTTAGGTGGTACCCGATTTGATAGCCTCAACAATGCTGTAAGGAGGAGGAGGAGTCAAACTTCACGCAGGCCTCGACCTGATTCACAGCCTGTGTCGGAAGAGCAAGAGCTGTCTCCCTTGTCAGCAACCCCCCCTTCAGAGGATGCTGGCAAGGCCTCCAGCGACGAGATTGCTGGTTATGATACTAATTCCAAGAGAAAAGAATTCAGTCTTAATCATTGTGTTTCTCAGGCCTCCTCTGCTACTGGAGCTGAGGATAATAAATCCCTAAGGAAGAGTAATAAGGATGAAGGATTCCATGTGTTATATAATAATGAACCTGGAAGGAGTGGTTCGAATAATAAACGCTGTAGCGAAGGTGTTCTTGCTCCAGCTAATTGGAAAGGGTCTAATAAATCAAAGGAGAGCTTTGAGTCAGAATCAAGAAATGCAGATATGTATGGTGAAAGGAATCCTGAGAGTATGAGTGTGGGGCAGCTTGGTGTCACCCAAGATGGATTGGGGAATAAGAACAAGGTTAAGAAGGTTAAACTCAGGGTTGGTGGTGTGACACGTACCATTCAATCTAACTCGTCGTCTAATGGTGCTTCAGGAATTGGAACAACTATGAAAAGTACACGCTCTTCAGATGCCTCAAGATCACGCCAAAAGCAACAGAGGGGCGGCTTACAAGGCCTTCGGTGGAAGGGATCCTCAAGGGGTTGTTTTAGTCTTGGGAAGGAGGAGTCACTGATGGGGAGGACATCTGGAAAAAACACATCTGGTCAGAAAAGAGACAAATCTGAACCAGTTCGTAAGAGCAAGCGAGTACCAAAAAGGCGAGTACTGGATGGAGAATTTGGTGATGACGATGATGAGGATGATGAGATTCGGTATTTGGAGAAGCTGAAAACATCGAAAGTTTCTGCAGTGTATAGAGATGAAGAAGAATTGAGTAAGAAGCATCGAAAACTCTCTAGTGTATCCAATTTGGAAAATGCTGCATCATCAAGATCAGGCAGAGATGGCAAGAAAAGGTCTAGATTCGAGGACACTGACTATGAGGCTGAAGAGGAGTCAGGTTCTGATGGCGAGCTTGAGGACAAGAAAAAGAAAAAACAGAGGAAAGAATCAGTTGATGTATTGATGGATGGTAAGAAGGAAATGACTCTCACTACACGTCAACGGGCCCTTCAATCAAGCAAAGATGCCTCAGCATCTGGTGCAAGTTTAATTGAGTTTCCCAATGGATTACCACCTGCCCCACCTAGAAAGCAAAAGGAGAAGCTTACAGAGGTGGAGCAGCAACTGAAGAAAGCCGAGGCTGCTCAAAGGCGTAAAATGCAGGTTGAGAAGGCTGCCAGAGAATCTGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGATTCCAGCAGGAAGAAGCGAGAAGAGAAAATAAAGAAGCGTCAACAAGAACTGGCAGAGGAGAAAGCAGCCAATGCAAGAATGCTTGCATCAAACACCGTGAGATATGTGATGGGTCCCTCTGGGACAGTTGTGACCTTTCCCGAGGAAATGGGGCTCCCTAGCATATTGAACTCCAAACCCATCAGTTATCCTCCACCGCGTGAGAAGTGTGCTGGTCCATCTTGTAGCAATCCATATAAGTATCGGGATTCAAAATCAAAGCTTCCTCTTTGCAGTCTCCAATGCTACAAGGCAGTCCAGGAGAATATGGCAGCCGCAACTAGAGCATGA 1725 0.4557 MEDLGGTRFDSLNNAVRRRRSQTSRRPRPDSQPVSEEQELSPLSATPPSEDAGKASSDEIAGYDTNSKRKEFSLNHCVSQASSATGAEDNKSLRKSNKDEGFHVLYNNEPGRSGSNNKRCSEGVLAPANWKGSNKSKESFESESRNADMYGERNPESMSVGQLGVTQDGLGNKNKVKKVKLRVGGVTRTIQSNSSSNGASGIGTTMKSTRSSDASRSRQKQQRGGLQGLRWKGSSRGCFSLGKEESLMGRTSGKNTSGQKRDKSEPVRKSKRVPKRRVLDGEFGDDDDEDDEIRYLEKLKTSKVSAVYRDEEELSKKHRKLSSVSNLENAASSRSGRDGKKRSRFEDTDYEAEEESGSDGELEDKKKKKQRKESVDVLMDGKKEMTLTTRQRALQSSKDASASGASLIEFPNGLPPAPPRKQKEKLTEVEQQLKKAEAAQRRKMQVEKAARESEAEAIRKILGQDSSRKKREEKIKKRQQELAEEKAANARMLASNTVRYVMGPSGTVVTFPEEMGLPSILNSKPISYPPPREKCAGPSCSNPYKYRDSKSKLPLCSLQCYKAVQENMAAATRA* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0719 574 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 571 - -
Ahy16g0719 574 MobiDBLite consensus disorder prediction 388 403 - -
Ahy16g0719 574 MobiDBLite consensus disorder prediction 308 424 - -
Ahy16g0719 574 Pfam PAPA-1-like conserved region 430 515 IPR006880 GO:0031011
Ahy16g0719 574 MobiDBLite consensus disorder prediction 436 485 - -
Ahy16g0719 574 Coils Coil 468 488 - -
Ahy16g0719 574 MobiDBLite consensus disorder prediction 186 212 - -
Ahy16g0719 574 Coils Coil 426 456 - -
Ahy16g0719 574 MobiDBLite consensus disorder prediction 136 150 - -
Ahy16g0719 574 MobiDBLite consensus disorder prediction 436 488 - -
Ahy16g0719 574 MobiDBLite consensus disorder prediction 308 323 - -
Ahy16g0719 574 SMART PAPA_1_2 430 515 IPR006880 GO:0031011
Ahy16g0719 574 MobiDBLite consensus disorder prediction 359 387 - -
Ahy16g0719 574 MobiDBLite consensus disorder prediction 1 292 - -
Ahy16g0719 574 PANTHER INO80 COMPLEX SUBUNIT B 1 571 IPR029523 GO:0006338|GO:0031011
Ahy16g0719 574 MobiDBLite consensus disorder prediction 256 282 - -
Ahy16g0719 574 MobiDBLite consensus disorder prediction 72 90 - -
Ahy16g0719 574 MobiDBLite consensus disorder prediction 334 349 - -
Ahy16g0719 574 Pfam HIT zinc finger 531 562 IPR007529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0719 Ahy-Chr16 13095263 13099235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0719 - - adu:107492293 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0719 16 13095263 13099235 Ahy16g0719 16 13095263 13099235 ECH
Ahy19g1190 19 22294925 22298858 Ahy16g0719 16 13095263 13099235 ECH
Ahy16g0719 16 13095263 13099235 Ahy19g1190 19 22294925 22298858 ECH
Ahy16g0719 16 13095263 13099235 Ahy6g0614 6 7579109 7583072 hybridization