Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0670 ATGGTGAAATCCCCTTCCTCTCCCTCTCCTGTGACCATAACGGTCTCTTCCGGAGGAAAAGAAAGCGGAAGCAGAAGCATAGGACTAACCAGTCCAGTTCCGCGCGCTTCCATCTCCAATAACCCTAATTCCCCCCTAAGGAGAGCTTCTGGTGGCGGCGGCGGCAGTGTTGTAAGGAGGTTATCAGGCGGAGGAGCCAACAACTATTCCTCAATTTCAAATACTACAGAAGAATTCAACTCAGAGTACTACACATACACTGTTCAAATTCCTGCCACTCCTGAACGCCAGCCATTGACAACCTCACAGACAAGCCTTCCCGAATATGGCAATAACACCGGAAAACCCGAGACAAGCTACATCTCAGGAACAATCTTCACTGGAGGGTTCAACTCCGTGACCCGAGGGCATGTCATTGAGTGTTCCATGGAGCAAGAGGAGCCAACAAAGAAAACTAAATCCATGTGTGGAATGAAAGGCTGCGACGAGAAAGCGATTCAAGGAAGGTCCAGCGGTGGTCCTTGCGAGTGCGGGTTCAAGATATGCAGAGAGTGTTACTTGGAATGTGTCGGAAATGGAGGAGGCAAGTGCCCTGGTTGCAAAGAGCCTTACAAGTATGTGAGTGATGATGAAGATGACGATGGCAAAGACTACGACGACGACGACGATGACGAGCGTGTTTCTGAGGCTGAAGATCAGGCTTTGCCTTTGCCTTCCATGGCTGAGTTCAAGCTGGACAAGAGGCTCTCTGTTGTGAAATCATTTAAGGCGCAGAATCATCCGCCGGATTTCGATCACAACCGCTGGCTATTCGAAACGAAGGGAACTTATGGCTATGGAAATGCTGTGTGGCCTAAAGATGGACATGGAGCTGGTTCAGCTTCGGAAATCCGTCCGGATTTCGGAGAGAAAGCCAGAAGGCCCTTGACACGAAAGGTTGGAGTATCTGCTGCCATTCTCAGTCCATACAGGTTGCTTATTCTGTTTCGTCTTGTTGCACTTGGATTGTTTCTAACATGGAGGATTAGACACCCGAACCGCGAAGCAATGTGGCTATGGGGAATGTCCATAACTTGTGAGCTATGGTTTGCATTCTCTTGGCTTCTTGATCAGCTCCCTAAGCTCTGTCCTGTAAACAGAGTAACTGATCTCTCTGTCCTGAAAGAGCGCTTTGAGTCACCGAACCTTCGCAATCCTAAGGGGAGGTCTGATCTACCTGGAATTGACGTTTTTGTTTCCACGGCAGACCCTGAGAAGGAGCCTCCTCTTGTCACAGCAAACACCATTCTCTCCATCCTAGCCGTTGATTATCCAGTGGAAAAGATTGCTTGCTACTTGTCTGATGATGGTGGAGCTCTGTTGACATTTGAAGCTCTCGCCGAGACTGCTAGCTTTGCTAGAATTTGGGTTCCTTTCTGCAGAAAACACAGTATAGAGCCTAGAAATCCCGAAGCATATTTTGGGCAAAAGCGCGATTTTCTCAAGAACAAAGTTAGATTGGACTTTGTGAGGGAGAGGAGAAGAGTGAAAAGAGAGTATGATGAATTCAAAGTGAGAATAAACTCCTTGCCAGAGTCAATAAGGAGGAGATCAGATGCTTACAATGCTCATGAGGAGCTAAGAGCAAAGAAGAAACAATCCGAAGCCGGTATCACTGCTTCCGAACCTATCAAGGTTCCTAAGGCAACATGGATGTCCGATGGTGCTTATTGGCCTGGAACTTGGGCTTCAGCAGAACCAGACCACTCCAGAGGGGATCATGAAGGCATAATCCAGGCAATGTTAGCTCCTCCAAATGCAGAAGAAGAATTTGGATCAGAAGCAGATGCGGAGAATTTGATTGACACAACAGGCGTAGACATTCGATTGCCAATGCTTGTGTATGTGTCAAGAGAGAAGAGGCCTGGATATGATCACAACAAGAAAGCGGGAGCGATGAACGCACTGGTTCGAACAAGCGCAATCATGTCGAATGGACCATTCATTCTGAATCTTGACTGTGATCACTACATCTACAACTCCCTGGCTCTCAGGGAAGGCATGTGTTTTATGCTCGACAGAGGAGGTGATAGGATATGCTATGTTCAATTCCCTCAAAGATTTGAAGGCATTGATCCGAGTGACCGATATGCGAACCACAACACGGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGATTACAAGGACCAATGTATGTGGGAACTGGCTGCATATTCAGAAGAACAGCACTTTATGGTTTTAGTCCTCCAAGAGCTACAGAACATCATGGATGGTTTGGAAGGAGGAAAATTAAGCTGTTTCTGAGAAAGCCAAAGAAGTCCAAGAAGGAAGAGGATGAAGTTGCTGTGGCGATCAATGATGATGACGCTGATATTGAGACATTGCTTCTTCCAAAGAGATTTGGCAACTCTACTTCTCTGGCGGCATCCATCCCTGTTGCAGAATATCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGAACACATGGAAGGCCAGCAGGCTCTCTCGCCGTGCCTCGCGAGCCCTTGGATGCTGCTACGGTTGCAGAGGCAATTAGTGTCATATCTTGCTTCTATGAGGACAAAACTGAATGGGGGAAGCGAGTTGGGTGGATATATGGTTCTGTTACAGAAGATGTAGTAACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTATTGTGTCACCAAGAGGGATGCTTTTCGAGGAACAGCTCCGATCAACTTGACAGATAGGCTCCACCAAGTTCTCCGCTGGGCGACCGGATCGGTGGAGATCTTCTTCTCAAAGAACAATGCAATGCTGGCAAGTCCTAGAATGAAGTTCTTGCAAAGAGTGGCATACTTCAATGTTGGAATGTACCCTTTCACCTCAATGTTTCTGATTGTGTATTGCTTCCTGCCTGCAATTTCTCTCTTCACTGGAAAGTTCATAGTGCAATCCTTAAGTGCAACATTCTTAGTCTTCTTGCTTGGCATCACAATCACACTCTGCTTGCTTGCACTCCTTGAGATCAAGTGGTCAGGGATCACTCTTCACGACTGGTGGCGAAATGAGCAGTTCTGGTTGATCGGTGGAACCAGCGCCCACCCTGCCGCCGTGCTCCAAGGCTTGTTGAAAGTCATAGCCGGAGTGGACATATCATTCACCCTCACTTCAAAATCAGCCACCCCGGAAGACGGAGACGACGAATTCGCAGACCTTTACGTGGTGAAATGGAGCTTCCTAATGGTTCCTCCGATCACAATCATGATGGTGAACATGATTGCTATTGCTGTGGGAGTAGCCAGAACTATCTACAGTCCATTTCCACAATGGAGCAAGCTGGTTGGAGGTGTGTTCTTCAGTTTCTGGGTTCTCTGCCATCTCTTCCCCTTTGCAAAGGGACTCATGGGAAGAAGAGGGAAGGTTCCAACCATTGTTTATGTTTGGTCTGGATTACTCTCTATTATCATATCATTGCTTTGGGTGTACATAAGCCCACCTTCAGGAGCAGCACAAAATTACATGAATTTCCAGTTCCCTTAG 3540 0.4726 MVKSPSSPSPVTITVSSGGKESGSRSIGLTSPVPRASISNNPNSPLRRASGGGGGSVVRRLSGGGANNYSSISNTTEEFNSEYYTYTVQIPATPERQPLTTSQTSLPEYGNNTGKPETSYISGTIFTGGFNSVTRGHVIECSMEQEEPTKKTKSMCGMKGCDEKAIQGRSSGGPCECGFKICRECYLECVGNGGGKCPGCKEPYKYVSDDEDDDGKDYDDDDDDERVSEAEDQALPLPSMAEFKLDKRLSVVKSFKAQNHPPDFDHNRWLFETKGTYGYGNAVWPKDGHGAGSASEIRPDFGEKARRPLTRKVGVSAAILSPYRLLILFRLVALGLFLTWRIRHPNREAMWLWGMSITCELWFAFSWLLDQLPKLCPVNRVTDLSVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKIACYLSDDGGALLTFEALAETASFARIWVPFCRKHSIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQSEAGITASEPIKVPKATWMSDGAYWPGTWASAEPDHSRGDHEGIIQAMLAPPNAEEEFGSEADAENLIDTTGVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWFGRRKIKLFLRKPKKSKKEEDEVAVAINDDDADIETLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGTHGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAMLASPRMKFLQRVAYFNVGMYPFTSMFLIVYCFLPAISLFTGKFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYVVKWSFLMVPPITIMMVNMIAIAVGVARTIYSPFPQWSKLVGGVFFSFWVLCHLFPFAKGLMGRRGKVPTIVYVWSGLLSIIISLLWVYISPPSGAAQNYMNFQFP* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0670 1179 SUPERFAMILY RING/U-box 161 206 - -
Ahy16g0670 1179 MobiDBLite consensus disorder prediction 1 47 - -
Ahy16g0670 1179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 229 IPR013083 -
Ahy16g0670 1179 SUPERFAMILY Nucleotide-diphospho-sugar transferases 423 973 IPR029044 -
Ahy16g0670 1179 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 104 1176 - -
Ahy16g0670 1179 MobiDBLite consensus disorder prediction 212 229 - -
Ahy16g0670 1179 MobiDBLite consensus disorder prediction 92 114 - -
Ahy16g0670 1179 MobiDBLite consensus disorder prediction 208 232 - -
Ahy16g0670 1179 Pfam RING/Ubox like zinc-binding domain 159 205 - -
Ahy16g0670 1179 MobiDBLite consensus disorder prediction 1 59 - -
Ahy16g0670 1179 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 104 1176 - -
Ahy16g0670 1179 Pfam Cellulose synthase 408 1170 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ahy16g0670 1179 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 610 760 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0670 Ahy-Chr16 12376535 12380825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0670 56 1179 Glycosyltransferase AT3G03050 66.375 0.0 1538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0670 K00770 - gmx:100804687 2003.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0670 16 12376535 12380825 Ahy16g0670 16 12376535 12380825 ECH
Ahy16g0670 16 12376535 12380825 Ahy6g0648 6 7996500 8000927 hybridization