Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0655 ATGGCATCTGCTTCTTCCATGTCAGTTTCTTTAGAATGTGTGAATGTGTGCAAGCAGTGGAGATGGGAAGGGGGTGGAAGATATGATTGTAATCTTCTGTCGTGTGCCTGGAAAGCTCCAAGGGTCCTTACTGGATTTCTTGCGAGCACGGCTCATCCTCATCAGTCTTCGTCCATGTCCCGGCAGCGAAATGGGAGAAGGAACCGGTATAATTTTGAATGCAAAGCCTTTAGTATAGTTAGTTCACATCCAGACGGAGCGCTTGATATCATACTTCTTGAAGGATTCTCTAAATCTATCTTGTCTCAAGTTGCTAGTAGAAGATGGCAGTTACGTAGTTCGTCAGCCTTCTCATTGGATACTGCCAATGATGTTACCCCTGAAAGTTTGTGGGAGGATCTTAAACCTGCGATCTCATACCTATCCCCTAAAGAACTAGAATTAGTTCATAATGCCCTTATGTTGGCGTTTGAAGCTCATGATGGTCAGAAAAGACGCAGTGGTGAACCTTTCATCATTCATCCAGTTGAGGTTGCACGTATTCTTGGAGAACTTGAACTTGACTGGGAATCGGTGGTAGCTGGGTTACTTCATGACACAGTTGAGGATACAAATCTTGTTACTTTTGAAAAGATTGAGGATGAGTTTGGTGCTACTGTACGCCACATTGTGGAAGGAGAAACCAAGGTGTCAAAGCTAGGAAAATTGAAGTATAAGAATGAAAATGATTCTGTTCAAGACGTAAAAGCAGAGGATCTTCGGCAAATGTTTCTAGCCATGACAGAGGAGGTTCGGGTTATTATTGTCAAATTAGCAGACCGGTTACATAACATGCGCACTCTATCTCATATGCCTCCACATAAACAGGCTAGCATTGCAATGGAGACATTACAGGTTTTTGCCCCCTTGGCAAAGTTGCTTGGGATGTATCAAATTAAGTCGGAACTAGAAAATCTTTCATTTATGTACACAAATGCTGAAGATTATGCTAAAGTCAAGAGGAGAGTTGCTGACCTATACAAAGAACATGAGAAAGAACTTATGGAGGCAAACAAAATATTGGTGAAGAAAATCCAAGACGATCAGTTCTTGGACCTTCTGACTATTAAGACAGAAGTCCGTGCGGTGTGCAAAGAGCCTTACAGTGTCTATAAGGCTGTTCTCAAATCAAAGGGATCAATCAATGAGATTAACCAAATTGCACAGCTTCGTATCATCATTAAACCAAAGCCATGCCTTGGGGTTGGTCCTTTATGCAATGCACAGCAGATTTGCTATCATGTTCTGGGTTTGGTCCATGGAATCTGGACCCCTATTCCTAGATCTGTGAAGGATTACATTGCAACCCCAAAACCCAATGGCTACCAGAGTCTTCATACAACTGTGATTCCGTTTTTGTATGAGAGCATGTTTAGGCTAGAAGTCCAGATTAGAACAGAAGAAATGGATTTGATAGCTGAAAGGGGCATTGCTGCTCATTATAGTGGGAGAGAATTTATCACTGGCTTGGTTGGAAGTGCATTGCCTAATAGTAAAAGTGCAAGAGGGAAGACTGTGTGTCTTAATAATGCCAACATTGCACTCAGAATTGGCTGGCTCAATGCAATTAGAGAGTGGCAAGAAGAGTTTGTTGGCAACATGAGTTCCAGGGAGTTTGTAGACACAATTACAAGAGATCTGTTGGGAAGTCGTGTCTTTGTGTTTACACCCAGGGGAGAGATTAAAAATCTTCCTCAAGGTGCTACTGTCATTGACTATGCTTATATGATACACACTGAAATTGGTAACAAGATGGTAGCTGCAAAGGTCAATGGTAATCTTGTTTCTCCTGCACGTGTACTTGCAAATGCAGAAGTAGTGGAGATAATCACATATAATGCACTTTCCAGCAAATCAGCTTTTCAGAGGCATAAGCAATGGTTGCAACATGCTAAAACCCGTAGTGCAAGGCACAAAATAATGAAGTTCCTTAGGGAGCAAGCCGCACGTTCTGCTTCTGACATCACAACGGAAGCAGTCAATGACTTTGTCACTGATTCTGAAGGAGAAAGTGAATCTGAAGAACTGTCACATGGTTCAAATGGTTGTAGACCAACGTGGGGAAAAATGTTTGTGAATGGAGTGGAAATAACAACTCCAGAAAGGAATCGGCTTCTCCCCCAAAGTAAGAATGGAAGTGTTTTCCCCAAGGTAAACGGAAAACATAACAAGCACGTGCATCATGTAAGCTTGAATGGCAAAGAACAGATGTTGAATGAGGGAAACAATTTGGCCAAGATAATTCAAGCTACCGTTCCAAGATATAAGGAAGTCCTGCCAGGTTTAGAAAGTTGGCAAGCTCAGAAAATTGCTACTTGGCACAATATTGAGGGGCACTCCATCCAATGGTTGTGTGTGGTATGCATAGACCGAAGAGGCATGATGGCCGAGGTCACAACAGCATTGGCCACAGCAGGCATAGCCATATGTTCTTGTATGGCTGAGATTGATGGAGGAAGAGGAATGGGTGTCATGTTATTTCACATAGAAGGAAACTTGGAAAACTTGGTGAATGCTTGCTCTATGGTGGATCATATATTAGGCGTTTTAGGGTGGTCTACCGGTTGCAGCTGGCCGAGCTTGGTGGAAGACAATGCTGTTCTCGAGTGCTAG 2652 0.4268 MASASSMSVSLECVNVCKQWRWEGGGRYDCNLLSCAWKAPRVLTGFLASTAHPHQSSSMSRQRNGRRNRYNFECKAFSIVSSHPDGALDIILLEGFSKSILSQVASRRWQLRSSSAFSLDTANDVTPESLWEDLKPAISYLSPKELELVHNALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESVVAGLLHDTVEDTNLVTFEKIEDEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQASIAMETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELMEANKILVKKIQDDQFLDLLTIKTEVRAVCKEPYSVYKAVLKSKGSINEINQIAQLRIIIKPKPCLGVGPLCNAQQICYHVLGLVHGIWTPIPRSVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGREFITGLVGSALPNSKSARGKTVCLNNANIALRIGWLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPRGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSPARVLANAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMKFLREQAARSASDITTEAVNDFVTDSEGESESEELSHGSNGCRPTWGKMFVNGVEITTPERNRLLPQSKNGSVFPKVNGKHNKHVHHVSLNGKEQMLNEGNNLAKIIQATVPRYKEVLPGLESWQAQKIATWHNIEGHSIQWLCVVCIDRRGMMAEVTTALATAGIAICSCMAEIDGGRGMGVMLFHIEGNLENLVNACSMVDHILGVLGWSTGCSWPSLVEDNAVLEC* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0655 883 Pfam HD domain 152 309 - -
Ahy16g0655 883 CDD ACT 797 852 - -
Ahy16g0655 883 SUPERFAMILY HD-domain/PDEase-like 136 324 - -
Ahy16g0655 883 Gene3D - 558 633 IPR012675 -
Ahy16g0655 883 Pfam TGS domain 565 624 IPR004095 -
Ahy16g0655 883 Gene3D Hypothetical protein af1432 125 324 - -
Ahy16g0655 883 Coils Coil 333 360 - -
Ahy16g0655 883 ProSiteProfiles TGS domain profile. 561 624 IPR004095 -
Ahy16g0655 883 SUPERFAMILY ACT-like 796 861 IPR045865 -
Ahy16g0655 883 PANTHER GTP DIPHOSPHOKINASE RSH1, CHLOROPLASTIC-RELATED 1 883 - -
Ahy16g0655 883 CDD TGS_RSH 566 624 IPR033655 -
Ahy16g0655 883 Gene3D Beta Polymerase, domain 2 326 480 IPR043519 -
Ahy16g0655 883 SMART RelA_SpoT_2 378 500 IPR007685 GO:0015969
Ahy16g0655 883 SUPERFAMILY Nucleotidyltransferase 328 499 IPR043519 -
Ahy16g0655 883 CDD NT_Rel-Spo_like 368 488 IPR007685 GO:0015969
Ahy16g0655 883 SMART hd_13 167 287 IPR003607 -
Ahy16g0655 883 Gene3D - 796 862 - -
Ahy16g0655 883 CDD HDc 169 300 IPR003607 -
Ahy16g0655 883 SUPERFAMILY TGS-like 552 624 IPR012676 -
Ahy16g0655 883 ProSiteProfiles HD domain profile. 171 278 IPR006674 -
Ahy16g0655 883 Pfam Region found in RelA / SpoT proteins 378 494 IPR007685 GO:0015969
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0655 Ahy-Chr16 12152774 12160184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0655 181 496 EF-hand Containing Proteins AT3G17470 29.179 5.69e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0655 K00951 - gmx:100814134 1512.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0655 16 12152774 12160184 Ahy16g0655 16 12152774 12160184 ECH
Ahy16g0655 16 12152774 12160184 Ahy6g0659 6 8140965 8148105 hybridization