Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0609 ATGGCTTCCCAAGAACTCAAACACCGGGTCACACACGATGCAGACACCAAAGCAGGAGGAGGAACAACAACAACAACAACAACCAGACGGGACAAGAAAATGGCGATGGCCAAACGCGGTCTTAGGTCACTCCTGATTGCCGTTATTCTCCCCTTGTCGCTGACGCTCTTCTCCGCATACATATCGAGCTCCATGTCACGTGCCAACCACCACATGGATCACAAGACTCCCTTCTGGTTCCCGCCCTCGTGGGCCCTACACCTAACTTTACCCGCTTCGGGCTTCCTGATGGGCCTCTCGGCCTGGATGGTTTGGGCCGAAGGAGGATTCCATAGGTACCCCGTAGCTGTGGTGCTCTACGTGGCTCAGCTCCTCTTAACGGTTCTGTGGGACCCGCTTGTGTTCGGTGCAGGTGCTTCGAGGGTGGGCATGGTGCTGTGCCTGGGTCTGTTTGGGTGCCTGTATGGGTGCATGCGTGTGTTTAAGCAGGTCAACCATGTTGCTGCTGATTTGATAAAGCCTTGTTTGGCTTGGACCGCTTTTCTCTCCATTGTAAATCTTAAGCTCCTTTCTGCCTAA 579 0.5406 MASQELKHRVTHDADTKAGGGTTTTTTTRRDKKMAMAKRGLRSLLIAVILPLSLTLFSAYISSSMSRANHHMDHKTPFWFPPSWALHLTLPASGFLMGLSAWMVWAEGGFHRYPVAVVLYVAQLLLTVLWDPLVFGAGASRVGMVLCLGLFGCLYGCMRVFKQVNHVAADLIKPCLAWTAFLSIVNLKLLSA* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0609 192 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 23 190 IPR004307 GO:0016021
Ahy16g0609 192 MobiDBLite consensus disorder prediction 1 30 - -
Ahy16g0609 192 MobiDBLite consensus disorder prediction 1 15 - -
Ahy16g0609 192 Pfam TspO/MBR family 47 189 IPR004307 GO:0016021
Ahy16g0609 192 PANTHER TSPO/MBR FAMILY PROTEIN 23 190 - -
Ahy16g0609 192 Gene3D TspO/MBR protein 39 191 IPR038330 -
Ahy16g0609 192 CDD TSPO_MBR 44 190 IPR004307 GO:0016021
Ahy16g0609 192 PIRSF PBR 33 192 IPR004307 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0609 Ahy-Chr16 11376610 11377494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0609 K05770 - gmx:100785785 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0609 16 11376610 11377494 Ahy16g0609 16 11376610 11377494 ECH
Ahy16g0609 16 11376610 11377494 Ahy6g0692 6 8506107 8507010 hybridization