Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0580 ATGGAGGATAGCCAGGAAATTGAGAAGCAGGTGCAGGAAGAAGTGATTTCAGATAATGGAACTGAAAAGAAGCAGGAAACTCGTGATGAGATGCTTTCGCGGCACAGGAAAGAGATATCACAACTGCAGAAAAAAGAAATTGAAATGAAAAAGGCAGCAGCTAGAGGTAGCAAGGCTGAACAGAAAGCTAAGAAGAAACAAGTGGAGGACGAGGTTACTCGACTTTCTGCTAATCTTAAAGAGAAACATGCAAAAGAACTGGCTGAATTAGGCTATAGCAGTGGTGGTAATGGGAATGAAAAGGGAAATTTAGACAGTTTGATAAAGGCCATAGCTGGAGTATCTGTTGCCAATCAGCCTGACCGTGCAAGGGTTAGCAAGGCCCAACAGAAGCGTGACCGAAGAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCAGAGCAGAGTGACACTATAAGTGATCGTACAATTGAAAATGAAAAATTGGAAAAGAAGTTGAAGCCTCTCGGTTTAACTGTGTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAGGATCAGCTGGCCCTCCTCTCTGGCGGTAGATCACCTCATACATACCAAGAACTTCGAGAAATGGCGGCTGCTTATATGAGAAAGAATTCAGCTGAGTTCCTGCCGTTTTTCCTTTCGGAAAATTTGATCGAAGATGATTCAGATGAAACACTTGCTCAGAAATTTGAAAACTATTGTAAAGAGGTGGAGTCCACGGCTTTATGGGGAGGACAGTTAGAGCTTGGTGCCTTGACTCACTGCTTGAAGAAGCATATTATGATATTTTCAGGCTCCTTCCCGGATGTGGAGATGGGGAAGGAGTATAAATCCGCCGCTGCCACTGCCTCATTGAGTTCAAGTATTATGCTTTCCTACCACAAGCATGCTTTTGGACTTGGTGAGCATTATAATTCTGTGGTCCCAGCATGA 978 0.4407 MEDSQEIEKQVQEEVISDNGTEKKQETRDEMLSRHRKEISQLQKKEIEMKKAAARGSKAEQKAKKKQVEDEVTRLSANLKEKHAKELAELGYSSGGNGNEKGNLDSLIKAIAGVSVANQPDRARVSKAQQKRDRRAQQEAEREQRIQAEQSDTISDRTIENEKLEKKLKPLGLTVCEIKPDGHCLYRAVEDQLALLSGGRSPHTYQELREMAAAYMRKNSAEFLPFFLSENLIEDDSDETLAQKFENYCKEVESTALWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSAAATASLSSSIMLSYHKHAFGLGEHYNSVVPA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0580 325 Coils Coil 32 85 - -
Ahy16g0580 325 PANTHER DEUBIQUITINASE OTUD6B 24 324 - -
Ahy16g0580 325 ProSiteProfiles OTU domain profile. 173 325 IPR003323 -
Ahy16g0580 325 SUPERFAMILY Cysteine proteinases 143 324 IPR038765 -
Ahy16g0580 325 MobiDBLite consensus disorder prediction 1 71 - -
Ahy16g0580 325 MobiDBLite consensus disorder prediction 118 157 - -
Ahy16g0580 325 MobiDBLite consensus disorder prediction 125 157 - -
Ahy16g0580 325 Gene3D - 159 324 - -
Ahy16g0580 325 PANTHER OTU DOMAIN CONTAINING PROTEIN 24 324 - -
Ahy16g0580 325 Pfam OTU-like cysteine protease 179 319 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0580 Ahy-Chr16 11047793 11051398 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0580 K18342 - gmx:100780620 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0580 16 11047793 11051398 Ahy16g0580 16 11047793 11051398 ECH
Ahy16g0580 16 11047793 11051398 Ahy6g0717 6 8731491 8735119 hybridization