Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0562 ATGGTGGAAAAAGCAGAAGTGATAATCGTAGGTGCTGGAACTTCAGGTTTAGCTGCTGCAGCATGCTTAACACAAAAATCAGTACCATTCACTCTTCTCGAAAGAGAAGATTGTTTTGCTTCCTTATGGCAAAAATACACCTATGACCGTCTTCACCTTCACCTTGGAAAAAAAGTGTGTGAGCTTCCCTTTCTTCCATTCCCTGATTCCTACCCTCGCTATGTTCCTAAGAAGCTCTTCATTGAGTATTTAGACTCATATGTGAAGCACTTCAACATCAACCCTTTGTACCACAGATCTGTGGAGCTTGCGGAGTTTGATGAGGTGGATCGGAAGTGGAAGGTGAAGGCTAAGAATAGAAGCTCCGGTGAGGTTGAAGAGTACTCTGGAAGGTTCTTGGTGGTGGCTACTGGGGAGACTGCCGAGCCACGTGTCCCTCGGGTTGAAGGTTTGGAGAGTTTCAAAGGGAGAGTGATGCACTCCACAGGATACAAGAATGGGAAGGAGTTCAAAGATGAACATGTTCTTGTTGTTGGTGCTGGTAATTCTGGCATGGAGATCGCTTTGGACTTGTCCAATTTCGGTGCCAAACCTTCCATCATTGTTCGAAGCCCGGTTCATATTCTATCAAGGAATATGATGTATTATTCAGGGATGTTGTTAAAGTATTTGTCCCTAAGCACGGTGGAGAAGCTGCTTGTTATAGTGAGTAAGATAGTGTATGGGGATCTGAGCAAGTATGGGTTACCTTGGCCAAGTGAAGGACCTTTCACCATGAAAATCAAGTATGGCAAGTTTCCTATCATTGACTTGGGAACTATCAAGAAAATCAAGCATGGAGAGATTCAGGTGTTATCGGCAGAAATAGAGAAAGTTAGAGGTAACGAAGTGTTGTTTAGAGATGGCAAGTGCCACTCATTTGATTCGATCATATTCTGCACTGGCTTCAATACATCAACACAAAAGTGGCTCAAGGGGGGTGATGATCTTCTGAATGAGAATGGTTTAGTCAAGGCAAGTAATTTTCCAAATTACTGGAAGGGTAAGAGCAATTTGTACTGCGTTGGGCTTGCACAAAGAGGATTCTTTGGAGCTAGCAGTGATGCCCAAAATGTAGCAAATGATATTGCCTCACTTCTCAATTAA 1146 0.4328 MVEKAEVIIVGAGTSGLAAAACLTQKSVPFTLLEREDCFASLWQKYTYDRLHLHLGKKVCELPFLPFPDSYPRYVPKKLFIEYLDSYVKHFNINPLYHRSVELAEFDEVDRKWKVKAKNRSSGEVEEYSGRFLVVATGETAEPRVPRVEGLESFKGRVMHSTGYKNGKEFKDEHVLVVGAGNSGMEIALDLSNFGAKPSIIVRSPVHILSRNMMYYSGMLLKYLSLSTVEKLLVIVSKIVYGDLSKYGLPWPSEGPFTMKIKYGKFPIIDLGTIKKIKHGEIQVLSAEIEKVRGNEVLFRDGKCHSFDSIIFCTGFNTSTQKWLKGGDDLLNENGLVKASNFPNYWKGKSNLYCVGLAQRGFFGASSDAQNVANDIASLLN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0562 381 SUPERFAMILY FAD/NAD(P)-binding domain 172 378 IPR036188 -
Ahy16g0562 381 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 4 380 - -
Ahy16g0562 381 Gene3D - 1 381 IPR036188 -
Ahy16g0562 381 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Ahy16g0562 381 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 194 - -
Ahy16g0562 381 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Ahy16g0562 381 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 4 380 - -
Ahy16g0562 381 PIRSF FMO 3 370 IPR000960 GO:0050660|GO:0050661
Ahy16g0562 381 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Ahy16g0562 381 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Ahy16g0562 381 SUPERFAMILY FAD/NAD(P)-binding domain 5 215 IPR036188 -
Ahy16g0562 381 Pfam Flavin-binding monooxygenase-like 6 319 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0562 Ahy-Chr16 10764524 10766707 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0562 K11816 - gmx:100777958 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0562 16 10764524 10766707 Ahy16g0562 16 10764524 10766707 ECH
Ahy16g0562 16 10764524 10766707 Ahy6g0735 6 9026833 9029269 hybridization