Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0483 ATGATGCCGCTAACAAAGCTTCTCTCAAGAACCGTCTCTTATGGCAGACCATTCGCCATGGCTGCAAAAGCCCTTCAACATTGCCGCTACTCTTCTGCGGCGGCGCAAGTTGCAGAATCAGAAACAGAAGCACTCAAGGACTACGCAGATTACAGGAGGTCCCTTTATGGCCACATCACTCACAAGGCGCTTCTTGTTGATGCTGTTGGCACTCTTGTTCTCCCTTCTCAGCCCATGGCCGAGATATATAGGACAATTGGGGAGAAATATGGAGTGGAGTACTCTGAGGATGAAATATTGCATAGATACAGAAGAGCTTATAGTCAACCTTGGGGCAAATCTCGTCTCAGATATGTTAATGATGGTAGGCCATTCTGGCAATACATAGTTAGCTATTCCACCGGCTGTTCGGATTCTCAATACTTTGAAGAACTTTATAACTACTATATGACAGACAAGGCATGGCATCTTTGTGATCCTGAAGCAGAAAAAGTGTTTAATGCTCTTAGAAAATCTGGTGTCAAATTGGCTATTGTATCGAATTTCGACACTCGACTGAGACCTGTCCTGCGGGCATTGAATTGTGAAAATTGGTTTGATGCAGTAGCAGTATCTGCCGAGGTTGCAGCTGAGAAGCCAAATCCAACCATATTTCTTAAAGCATGTGAACTACTGGGCGTAAACCCCGAGGATGCTGTTCATGTTGGCGATGATCGTAGAAATGATGTCTGGGGTGCAAGAGATGCAGGCTGCGATGCTTGGCTTTGGGGAAGTGATGTTCACTCCTTTAAAGAGGTAGCTCAGAGGATTGGAGTGCAGGTCTGA 825 0.457 MMPLTKLLSRTVSYGRPFAMAAKALQHCRYSSAAAQVAESETEALKDYADYRRSLYGHITHKALLVDAVGTLVLPSQPMAEIYRTIGEKYGVEYSEDEILHRYRRAYSQPWGKSRLRYVNDGRPFWQYIVSYSTGCSDSQYFEELYNYYMTDKAWHLCDPEAEKVFNALRKSGVKLAIVSNFDTRLRPVLRALNCENWFDAVAVSAEVAAEKPNPTIFLKACELLGVNPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRIGVQV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0483 274 PANTHER - 22 274 - -
Ahy16g0483 274 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 22 274 - -
Ahy16g0483 274 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 62 255 IPR011949 -
Ahy16g0483 274 CDD HAD_dREG-2_like 162 273 - -
Ahy16g0483 274 Gene3D - 66 258 IPR023214 -
Ahy16g0483 274 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 62 256 - -
Ahy16g0483 274 Pfam Haloacid dehalogenase-like hydrolase 70 253 IPR041492 -
Ahy16g0483 274 SFLD Haloacid Dehalogenase 62 256 - -
Ahy16g0483 274 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 170 250 IPR006439 -
Ahy16g0483 274 Gene3D - 77 150 IPR044924 -
Ahy16g0483 274 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 151 252 IPR006439 -
Ahy16g0483 274 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 199 215 IPR006439 -
Ahy16g0483 274 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 217 237 IPR006439 -
Ahy16g0483 274 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 169 182 IPR006439 -
Ahy16g0483 274 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 61 72 IPR006439 -
Ahy16g0483 274 SUPERFAMILY HAD-like 62 265 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0483 Ahy-Chr16 8978498 8981001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0483 - - adu:107492671 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0483 16 8978498 8981001 Ahy6g0852 6 10689256 10691739 hybridization