Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0420 ATGGCGTGTAACGGCTCTGGTTGCCAATCCGGTTGCTACAAAGACGAAGAAGAACCGAAGCGTGAGAATCTAGCAGTTCCAACAAAAACCGATTCAGCGAGCAATGGGAACATCTGCGTCAAGTGCAAGCTGAACGACTCCGTTTCGGGTTACGGCGGCATCGACGATGGTCGCTTCTGCGCTGATTGCTTCAGGAGCAACCTGTTTGGGAAGTTCAGATACGCCGTCACCTCGAACGCCATGATCTCTCCCACCGATAAGGTCCTTGTTGCATTCTCAGGTGGCCCTTCTTCAAGGATAGCTTTGCAGTATGTGCATGATTTGCAAGAGAGGGCACAGAAGAATTTTGATGCCTGTAGAGATAGGTCGTTGCCTGTGTTTGGTGTTGGAGTGGTGTTTATAGATGAGAGTGCTGTTGTGCCGATTCCTTCTGGTGAGATGGATGAGGCGGTTGGATTTGTTTCTTCGGTTGTTTCGTGTTTAGCCCCGCCAAAGAAGGAGTTGCATGTTGTTCCTATTGAGACAATTTACTCGTCCGATTCTAGTGACGGAAAGGAGAGGCTGTTAAAGATTCTGAATGCTGTGAGTGATCCCACTGGAAGGGAGGATTTGTTGGTTAATATTCGCATGTTGGCACTTCAAAAGGTTGCTTCTGAATTTGGTTATAACAGACTTGTTCTAGGATCATGCATTTCAAGAATTGCTTCTCATGTCATTTCAGCCACTGTGAAGGGTCAGGGATATTCATTACCTGCAGATATACAGTATGTTGATGCTCGATGGGAAATTCCAGTTGTGCTTCCTCTACGTGATTGTTTCGCTCAAGAGATCAACATGCTTTGCCGCCTTGATGGTCTAAAGACTTTAAAGTTGTCTACAAGTCCAAGCTCTACCATCAATGGCTTGGTCTCATCATTTGTACAATTATTGCAGGAAGAAAACCCATCTAGAGAGAGCACAATTGTGAGAACAGCTGGGAAACTCATTCCTTTCCAATTTAACAAGATTCCCGAGATCACTGATGGTCATGTTCCCTTGGCAACTCGAAGACGCCAAAAGAGATATAATCTCAAATCGAATGAATCTGTTTCCTCGGAATCTTTCTGTCCTCTCTGCAATAGCCCACTTGATAAGTCTGAGATTGTTAATCGAAGCAACCATGATAATGGTAGCACTGGTGAATTTTTTTATGCTGCTTGCTGTTCTAGTTGTCAGTATCAGATACTTCCAAGAGATTCCACGACAATGGAGCAATTTTATACGGATTTACCCCAATCTATAATTTCCAGATCAGAGGAAGCAAACAATTGTAACTTGAGTCTGCTAAGGGAACAAATACAAGATTGCTTGCTTTCAGATGATGAAGAAGAAACTTAG 1377 0.4394 MACNGSGCQSGCYKDEEEPKRENLAVPTKTDSASNGNICVKCKLNDSVSGYGGIDDGRFCADCFRSNLFGKFRYAVTSNAMISPTDKVLVAFSGGPSSRIALQYVHDLQERAQKNFDACRDRSLPVFGVGVVFIDESAVVPIPSGEMDEAVGFVSSVVSCLAPPKKELHVVPIETIYSSDSSDGKERLLKILNAVSDPTGREDLLVNIRMLALQKVASEFGYNRLVLGSCISRIASHVISATVKGQGYSLPADIQYVDARWEIPVVLPLRDCFAQEINMLCRLDGLKTLKLSTSPSSTINGLVSSFVQLLQEENPSRESTIVRTAGKLIPFQFNKIPEITDGHVPLATRRRQKRYNLKSNESVSSESFCPLCNSPLDKSEIVNRSNHDNGSTGEFFYAACCSSCQYQILPRDSTTMEQFYTDLPQSIISRSEEANNCNLSLLREQIQDCLLSDDEEET* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0420 458 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 289 - -
Ahy16g0420 458 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 31 452 IPR019407 GO:0000049|GO:0002098|GO:0034227
Ahy16g0420 458 Pfam Cytoplasmic tRNA 2-thiolation protein 2 298 380 IPR019407 GO:0000049|GO:0002098|GO:0034227
Ahy16g0420 458 Gene3D HUPs 38 393 IPR014729 -
Ahy16g0420 458 Hamap Cytoplasmic tRNA 2-thiolation protein 2 [CTU2]. 29 412 IPR019407 GO:0000049|GO:0002098|GO:0034227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0420 Ahy-Chr16 8047745 8050981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0420 K14169 - gmx:100804325 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0420 16 8047745 8050981 Ahy16g0420 16 8047745 8050981 ECH
Ahy16g0420 16 8047745 8050981 Ahy6g0908 6 11695875 11699156 hybridization