Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0405 ATGGCTGAATCATTCATCTTCAGCATCGCTGAATCACTCGCTGCCAAGCTTGCTTCTCGTGCATACCAAGAAGCGTCTCGGCTGGTTGGTGTCTACGATGACCTCCAAGAATTGAAAAGCAGTCTCTCATATGTGAAAGCTGTGCTGTTGGATGCTGAGCAGAAGCAGGAGCACAACCACGAACTGCGGGAGTGGCTGAAGCAGATCAAACTCATCTTCTATGATGCTGAGAACTTTCTTGATGAAGTTGACTGTGAAACACTGAGCAAGCAAGTCGTCAGAGACTACGGCACTCCCAAGGACAAGGTAGGTCGCTTCTTCTCGAGTTCTAATCCACTTGTCTTTCGCTATAAGCTTGGTCATCAGATCAAAGAGATTAAGAAGAGATTAGACAGAGTTGCGGCCGATAGGAATAAGTTTGGGCTTCAAGTAATTGATGTTGATAGGCGAGCTGTTCATAGAAGGGAGATGACTTACTCCCATGTTGTTGAGTCTAAGGTCGTAGGGAGGGAACATGATAAAGAAATGATCATGAAGCTCCTGATGGAACCGAGTCTTGACGACAACGGTGGCTCTAAACATATCTCTGTTATTCCCATTGTGGGAATCGGAGGCTTGGGAAAGACCACTCTTGCTAGGCTCGTCTACAGTAATAAGAGGGTAACTGAGTCTTTCCCATTGAAAATGTGGGTGAGTGTTCCTGATGATTTTAATGTTAGATCATTGATTATCAAAATCATCAATTCTCCTAGCGACTTTGCTTCTTCTACTGATGCTCCTGCGGGCCAACAAAACTTAAGAGACTTAGAGATTGAGCAATTGCAACATCGTCTAAGAAACATGCTTGAGGATCAAAAGTTCCTGCTGGTCTTGGATGACGTATGGAATGAAGATCGTGTTAAATGGGTTGAGCTGCAAGATCTCATTTCAGTGGGTGCTCAAGGAAGCAAAGTAATAGTCACAACACGTAGCCAGTCCATCGCTTCCATGATGGGTACTGTTGCCTGCTCGCACAATTTAGAAAGTCTTTCTCCCGAGGATTCATTGCGATTGTTTGTTAGATGGGCTTTTAAAGAAGGCGAAGAGGAAAAATATCCAGAATTGATAAGGATTGGAAGAGAAATCGTAGAGAAGTGCAAAGGAGTTCCTTTAGCTGTGAGAACATTGGGAAGCTCACTATTTTCCAAACACGAGACACAAGAGTGGGAAGCACTGAGAGACAAGGAGATTTGGGATTTGCCGCAAAAAGAGGATGATATCTTACCTGCATTAAAATTAAGCTATGATGAAATGCCATCCCATTTGAGGCAATGTTTTGCTTTGCTCTCCCTTTATCCAAAGAATCATGCATTTATTTCTTTAGACGTTGCTTCACTTTGGGGGGCAGCAGGTTTGCTTTCATTGCAAAGCCAAGATAAATCGATGGTAGACATTGCACACCAATATTTGAGAGACTTAATGGCAAGATCTTTTCTCCATGACGTTTTTGATTGTGGTTCTTTTTATTTTTTTTTAATACATGATTTAGTGCATGATCTTGCAGTATATGTTGCAAAAGATGTGTGCCAATTGGTCAGTTCAAACACTCAGGATATATCAGAAAACGTCCTGCATTTGTCTTTTGTTGAGAATGGTTTGCGTTGCAATTCCATCAAGCCAAGCTTACAAGGTGCAAGAAGCATTCTGTTTCCAGTTAACGAAGTGGGAGCCAGTGAAGCTTTCTTGAATGCATGGGTGTCAAACTGCAAATACCTGCGATATTTGGATTTAAGTGATTCTACATGTGAGACTTTGCCTCAGTCAATTAGTAAGTTGAAACATTTAAGATCTATTTCTCTTTGTAATAATACAAGAATAAAGAGGCTCCCTAGTTCTATTTGCAAGCTCCAAAATTTGCAAGTTTTGCGTCTTGATGGGTGTTCAAATCTGGAAACTTTACCGAAAAAGTTAAGAAAGTTGATCAGCCTGCAAAGATTGGAGATAACCACAAAGCAATCTATCTTGCCAGAGAGTGACATTGCAAAGTTGAATCGTCTTGAATATTTATGCGTCCAAGATTGTGATAATTTGGAGTCCTTGTTTGTTGAGACAAGATTGCCTACACTTCGAACTTTGCAAGTTAGTGGCTGTGCGAATCTAAAGTCTTTGCCACTTGATACTCACCATTTTCCTCAGTTAGAAACTTTGGTAATCCCCGGTATTGCCAATGAAGATTGGCTTGATAGATCGGAGGATACTAATGCTGTCTTGAGGTTAAAATCTATTTATTTTTATGGAATGGTAACATTGCCTCATTCTCTCCAACAATATGCAAGCACGTTACAAACTTTGGTGATTGCATGCTTCTACGAGCTGGAGGTACTACCCGAATGGCTGTGGAATCTGAGTTCTTTGAAATCTCTTTATATCTCTGAATGTCCGAAATTGAAGTCTCTTCCCAGTGATATCCACCGACTAACTAGTCTCCAAGTTTTGGGAATCATAAAGTGCCGTGAGTTATATAGAAAATACGAGCCACAAGTTGGAGAGTGCTGGCCCATGATATCTCACATCAAGCATACTTACATTAGGGACACATGGGAGTAG 2586 0.4134 MAESFIFSIAESLAAKLASRAYQEASRLVGVYDDLQELKSSLSYVKAVLLDAEQKQEHNHELREWLKQIKLIFYDAENFLDEVDCETLSKQVVRDYGTPKDKVGRFFSSSNPLVFRYKLGHQIKEIKKRLDRVAADRNKFGLQVIDVDRRAVHRREMTYSHVVESKVVGREHDKEMIMKLLMEPSLDDNGGSKHISVIPIVGIGGLGKTTLARLVYSNKRVTESFPLKMWVSVPDDFNVRSLIIKIINSPSDFASSTDAPAGQQNLRDLEIEQLQHRLRNMLEDQKFLLVLDDVWNEDRVKWVELQDLISVGAQGSKVIVTTRSQSIASMMGTVACSHNLESLSPEDSLRLFVRWAFKEGEEEKYPELIRIGREIVEKCKGVPLAVRTLGSSLFSKHETQEWEALRDKEIWDLPQKEDDILPALKLSYDEMPSHLRQCFALLSLYPKNHAFISLDVASLWGAAGLLSLQSQDKSMVDIAHQYLRDLMARSFLHDVFDCGSFYFFLIHDLVHDLAVYVAKDVCQLVSSNTQDISENVLHLSFVENGLRCNSIKPSLQGARSILFPVNEVGASEAFLNAWVSNCKYLRYLDLSDSTCETLPQSISKLKHLRSISLCNNTRIKRLPSSICKLQNLQVLRLDGCSNLETLPKKLRKLISLQRLEITTKQSILPESDIAKLNRLEYLCVQDCDNLESLFVETRLPTLRTLQVSGCANLKSLPLDTHHFPQLETLVIPGIANEDWLDRSEDTNAVLRLKSIYFYGMVTLPHSLQQYASTLQTLVIACFYELEVLPEWLWNLSSLKSLYISECPKLKSLPSDIHRLTSLQVLGIIKCRELYRKYEPQVGECWPMISHIKHTYIRDTWE* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0405 861 CDD RX-CC_like 2 134 IPR038005 -
Ahy16g0405 861 Gene3D Ribonuclease Inhibitor 523 743 IPR032675 -
Ahy16g0405 861 Gene3D Ribonuclease Inhibitor 749 841 IPR032675 -
Ahy16g0405 861 SUPERFAMILY L domain-like 506 830 - -
Ahy16g0405 861 PANTHER DISEASE RESISTANCE PROTEIN RP 6 780 IPR044974 GO:0006952
Ahy16g0405 861 Gene3D - 10 124 - -
Ahy16g0405 861 Pfam NB-ARC domain 193 429 IPR002182 GO:0043531
Ahy16g0405 861 Gene3D - 149 335 IPR027417 -
Ahy16g0405 861 PRINTS Disease resistance protein signature 197 212 - -
Ahy16g0405 861 PRINTS Disease resistance protein signature 379 393 - -
Ahy16g0405 861 PRINTS Disease resistance protein signature 281 295 - -
Ahy16g0405 861 PRINTS Disease resistance protein signature 627 643 - -
Ahy16g0405 861 Gene3D - 427 516 IPR036388 -
Ahy16g0405 861 Pfam Rx N-terminal domain 11 99 IPR041118 -
Ahy16g0405 861 Gene3D - 342 426 IPR042197 -
Ahy16g0405 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 442 IPR027417 -
Ahy16g0405 861 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0405 Ahy-Chr16 7861051 7864630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0405 585 763 Miscellaneous Gene Families AT4G39270 27.962 1.24e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0405 - - gmx:100777049 981.474