Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0396 ATGGGAGAAGCACCAGCATTCCTTGTTGATGACCTTCAGAATGAGCCTCTTAATGGATTTGAATTGAAAAATGGAACTTGCAAAACTGCAACTACAATTGGAAATAAAATGTATGTCATTGGTGGCGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAGTCTTGGAGAATGGATTCATCCCACCGTGCATGGCACCAAACCTCTGTCGAGCAAAGGCCACTCCGCGGTGTTTTTGAACGACCGAATACTAATTCTTAAGAAGGGTGCCAAGTCAGATGATCAAATATGGTTTTTGGAGGTGGACACTCAATATGTTAGGCAGCAGCAAAAACAACTGGGGACTGAGGTTGTTGCGTGGAGTAAGGGAGTGACAGGTAATGCCGAGAAGCCGGTTGTTATCAGTGGACCTTCTGGGGTAGGCAAAGGAACACTGATATCAATGCTGATGAAGGAATTCCCATCCATGTTTGGTTTTTCGGTGAGCCACACCACTCGTGCACCAAGGGGCATGGAGAAAGATGGAGTCCATTACCATTTTACTGAGAAGAGTGTAATGGAGAAAGAGATTAAAGATGGAAAATTTCTTGAGTTTGCTTCTGTCCATGGTAATTTGTATGGGACCAGTGTTGAGGCTGTTGAAGTAGTAGCAGATGCTGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGCGCCAGATCCGTGAGGTCTAGTTCTCTTGAAGCCGTATTCATATTTGTTTGTCCCCCATCAATGGAAGAGCTGGAGAAGCGCCTTCGTGACAGAGGGACAGAGACAGAAGAACAAATCTTGAAGCGACTCCGAAATGCTGCAGCTGAGATCGAGCAAGGGAAATCATCAAACATATTTGATTTCATCTTATACAATGATAACCTTGAGGAGTGTTACGAGAAACTCAAGAAATTATTGGGACTCGGTGGTTGTGTTGCTGCTACACCTAAATCAGCACTTAGAGAGTTAAATCTACCATTGGATCATTCGGTGTCAAAAATCGATGACAAGATTATCATAAACTGCATCTCTTCTGGACTGGAGAAGGAATCAAAGAATTTAATCATGTTGGATGTCTCCGCGCTCAAAGGAGGCGCACCCGGACGGACAAGAGGATTGGATTTTCAGGCTATCGGCTCGTTTTCGGATGGTTTGATTGGGATGGAAAGGCTTAGCTAA 1203 0.4372 MGEAPAFLVDDLQNEPLNGFELKNGTCKTATTIGNKMYVIGGADDGTLSIEVQIFDRSLGEWIHPTVHGTKPLSSKGHSAVFLNDRILILKKGAKSDDQIWFLEVDTQYVRQQQKQLGTEVVAWSKGVTGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKSVMEKEIKDGKFLEFASVHGNLYGTSVEAVEVVADAGKRCILDIDVQGARSVRSSSLEAVFIFVCPPSMEELEKRLRDRGTETEEQILKRLRNAAAEIEQGKSSNIFDFILYNDNLEECYEKLKKLLGLGGCVAATPKSALRELNLPLDHSVSKIDDKIIINCISSGLEKESKNLIMLDVSALKGGAPGRTRGLDFQAIGSFSDGLIGMERLS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0396 400 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 341 - -
Ahy16g0396 400 CDD GMPK 135 308 - -
Ahy16g0396 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Ahy16g0396 400 Gene3D - 23 125 IPR015915 GO:0005515
Ahy16g0396 400 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Ahy16g0396 400 SMART gk_7 132 318 IPR008145 -
Ahy16g0396 400 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Ahy16g0396 400 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Ahy16g0396 400 Pfam Kelch motif 27 62 IPR006652 GO:0005515
Ahy16g0396 400 Gene3D - 126 316 IPR027417 -
Ahy16g0396 400 Pfam Guanylate kinase 133 314 IPR008145 -
Ahy16g0396 400 PANTHER GUANYLATE KINASE-RELATED 1 341 - -
Ahy16g0396 400 SUPERFAMILY Galactose oxidase, central domain 29 112 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0396 Ahy-Chr16 7706092 7709670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0396 K00942 - gmx:100527163 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0396 16 7706092 7709670 Ahy16g0396 16 7706092 7709670 ECH
Ahy16g0396 16 7706092 7709670 Ahy6g0928 6 12044636 12048205 hybridization