Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0340 ATGCAAGGAGCAAAGAATACTGGACAGAGCATTAAGGAGAAAGCTGCTAATGTTGGTGCTTCTGCTCAAGCTGGTTTGGAGAAAACCAAGGCCACCGTCCAAGAGAAGGCTGAGAGGATGAGTACACGTGACCCTGTCCAAAAACAGATGGCAACACAAAAGAAGGAACACAAGACCAACCAAGCCGAGATGGAGAAGCAGGCTGCTTATAATCAAAACGCTGCCCAAAAAGAGGCGGCACGTGCCGACAACGTGGCCCCAGGCTACGGAACTGCCACTCATTCCACAACCGGACAACATGGACATCCTACTGGAGGCCACCAGATGTCTGCGTTACCTGGCCATGGAACTGGACAGCCCACAGGTCAGGTGACTGAGGGAGTGATAGGCTCGCGTCCTAGTGGGACTAACACCGGCACCACTCAAACCTCTACAACCACCACTACCGCTCGTAATACACGTGCTGGTGTTAATCCCAATGATCCTGGGTATGGGTATTGA 501 0.523 MQGAKNTGQSIKEKAANVGASAQAGLEKTKATVQEKAERMSTRDPVQKQMATQKKEHKTNQAEMEKQAAYNQNAAQKEAARADNVAPGYGTATHSTTGQHGHPTGGHQMSALPGHGTGQPTGQVTEGVIGSRPSGTNTGTTQTSTTTTTARNTRAGVNPNDPGYGY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0340 166 MobiDBLite consensus disorder prediction 114 156 - -
Ahy16g0340 166 Pfam Late embryogenesis abundant (LEA) group 1 9 78 IPR005513 GO:0009793
Ahy16g0340 166 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 157 IPR005513 GO:0009793
Ahy16g0340 166 MobiDBLite consensus disorder prediction 1 16 - -
Ahy16g0340 166 MobiDBLite consensus disorder prediction 31 63 - -
Ahy16g0340 166 MobiDBLite consensus disorder prediction 1 166 - -
Ahy16g0340 166 MobiDBLite consensus disorder prediction 89 104 - -
Ahy16g0340 166 PANTHER 18 KDA SEED MATURATION PROTEIN-RELATED 1 157 - -
Ahy16g0340 166 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0340 Ahy-Chr16 6888548 6889914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0340 - - aip:107645421 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0340 16 6888548 6889914 Ahy16g0340 16 6888548 6889914 ECH
Ahy16g0340 16 6888548 6889914 Ahy6g0991 6 13076939 13078288 hybridization