Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0329 ATGGGATCAATAATGCGCAAAGACCCAAGCGTTGTCCACTTTAGTCATCCACATCCATTGGAATTCACCACAGAATTAAACAATAATAACAATGTAACATGCTTTGGCTGCAAGCTAAGTTTCATGAATGGTGAATCCTACTACCATTGCGAACCCTGCAACTTCTCTCTCCACTATGCATGCTTCAAGATGCCACTGATAACAAAGCATCCATCCCATTCCAAACACGATCTAGTCCTCATCGTCATACCATCCTCACCGGCCACCAGAGCAACCCTAAGATGCGCCGCGTGCGGCCACCACGTCACCGGATTCACCTACCACTGCGCCGAATGCAGCAGCGTATTCTTCCACGCCTTCTGCCTGGCGCTGCCGCTGTCCGTGGCCATCTCGCCGCACCCTCACAGAATGGAGCTCGAATTCATGCCTCCCTATGACTTCTTCTGTGACTTGTGCACCAAGTCAACCTACAACATTGGTTGGCTATACAGATGCAGGATGTGCGAGTTCGACTCGCACATCGCCTGCGCTGTTCAGAACATCGAACCGCAGTCGGTTGAGCATCCTTCTTTCACTCAGGCCAACGCTTTGATGACGCAGTTCACCGCCCACCACGGCGGCGGCATGGTGTATGAGATCATGCGTTTGGTTGCCACGCAGATCCAACAAGGAAAAGTTGTTGGTAGTCCAAGTCCATCACGAGGTCGTGATTTCAGAGCGTATTTGGAAGAAAGAACACCGTTGAGAGATAAATCCACGCCGAGTCGCCAATTCAGCGAGGCATATTTTTCGATAGATTTGAACGCGAAGAAAGACGGTGATGATCAGAAAAGTAATAAGAATCATCTAAGCGTTGTTGCAGAGAGGAGCGAAGGGGATAAGAGTGTTAAGTTGAACTCAGCAGTTTTTGAAGAACTTGGTGAAGCAAATCATAAAGTGGTGATGGTAATGAATCAAAACTCTAAGCAAAGATTATTGCCCACTCCTAAAACCAATCATAAACCTTCACACTCGGGAAGAGATAGCGGCTCATCTGGTTGGAAGAAGTTCCTGTCATGTTGCCTTTAA 1068 0.4803 MGSIMRKDPSVVHFSHPHPLEFTTELNNNNNVTCFGCKLSFMNGESYYHCEPCNFSLHYACFKMPLITKHPSHSKHDLVLIVIPSSPATRATLRCAACGHHVTGFTYHCAECSSVFFHAFCLALPLSVAISPHPHRMELEFMPPYDFFCDLCTKSTYNIGWLYRCRMCEFDSHIACAVQNIEPQSVEHPSFTQANALMTQFTAHHGGGMVYEIMRLVATQIQQGKVVGSPSPSRGRDFRAYLEERTPLRDKSTPSRQFSEAYFSIDLNAKKDGDDQKSNKNHLSVVAERSEGDKSVKLNSAVFEELGEANHKVVMVMNQNSKQRLLPTPKTNHKPSHSGRDSGSSGWKKFLSCCL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0329 355 Pfam C1 domain 71 121 IPR004146 -
Ahy16g0329 355 Pfam C1 domain 133 177 IPR004146 -
Ahy16g0329 355 Pfam C1 domain 14 61 IPR004146 -
Ahy16g0329 355 MobiDBLite consensus disorder prediction 323 345 - -
Ahy16g0329 355 SUPERFAMILY Cysteine-rich domain 44 135 IPR046349 -
Ahy16g0329 355 SUPERFAMILY Cysteine-rich domain 115 179 IPR046349 -
Ahy16g0329 355 PANTHER - 11 291 - -
Ahy16g0329 355 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 11 291 - -
Ahy16g0329 355 SMART PHD_3 94 153 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0329 Ahy-Chr16 6829965 6831764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0329 - - adu:107492808 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0329 16 6829965 6831764 Ahy16g0329 16 6829965 6831764 ECH
Ahy16g0329 16 6829965 6831764 Ahy6g1003 6 13164677 13166279 hybridization