Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0323 ATGTCTGCTACAGGGTTATTATATCCACATATTCTCTATGGTGAAGTCGTAGTTTACCAGAGAGATCAACAGCACCAGCACCAGCACCAGTGCTTGGTAAGTAGTAGTAGTGGCAGATACGTGTTTTTATCTTCATTGAAGAGTAGTAGTGGTTGCGGGAACGCTTCTTTTGGGCAGAGGATTAGGCGGAGGAATTTCAGAGTTGAAGCGACGTGGCCAGATTTGTCAAGACCAAGTGTCATAGAGATGGAATCCATTGATGATAGTGAGCAGCTTGATCAAATTCTGCTTCATGCTCAGCAAAATTCACAACCCATCATCATTGATTGGATGGCTGCTTGGTGCCGTAAATGCATATATTTGAAGCCCAAGTTGGAGAAATTGGCTGCGGAGTATGACACAAAGATCAAATTTTATTACGTGGATGTGAATAAAGTGCCTCAGACTCTAGTGAAGCGTGGCAATATCTCTAAAATGCCAACAATTCAGTTGTGGAAAGATGGGGAGATGAAAGCAGAGGTGATTGGAGGCCACAAGGCCTGGCTAGTCATTGAAGAAGTCAGAGAAATGATCCTAAAGTTTCTATAG 588 0.4303 MSATGLLYPHILYGEVVVYQRDQQHQHQHQCLVSSSSGRYVFLSSLKSSSGCGNASFGQRIRRRNFRVEATWPDLSRPSVIEMESIDDSEQLDQILLHAQQNSQPIIIDWMAAWCRKCIYLKPKLEKLAAEYDTKIKFYYVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMILKFL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0323 195 CDD TRX_family 90 191 - -
Ahy16g0323 195 SUPERFAMILY Thioredoxin-like 83 191 IPR036249 -
Ahy16g0323 195 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 6 194 IPR044253 GO:0009570
Ahy16g0323 195 Pfam Thioredoxin 100 180 IPR013766 -
Ahy16g0323 195 Gene3D Glutaredoxin 80 191 - -
Ahy16g0323 195 ProSiteProfiles Thioredoxin domain profile. 66 195 IPR013766 -
Ahy16g0323 195 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 6 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0323 Ahy-Chr16 6730646 6732299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0323 - - adu:107492880 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0323 16 6730646 6732299 Ahy16g0323 16 6730646 6732299 ECH
Ahy16g0323 16 6730646 6732299 Ahy6g1009 6 13261493 13263184 hybridization