Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0309 ATGGCTAAAACCTTAACCTTCTTCTCCACACTCACCGTCCTCTTCTTCCTCTTCTCGTCCTATGTAACAGCCAAACAACCTCGCTTCTATCGAAGCATCTCTCCCACATCTCTGGGCCTCCGCAAAGAGAAGCTCAGCCACCTCCATTTCTATTTCCACGACATTGTCAGCGGCCCAAAGCCCACCGCCATAAGGGTGGCCGAGGCCCAAGTGACAAAACATTCCCCCACCCTCTTCGGAGCGGTGGTCATGATCGACGACCCCTTGACAGTGGGGCCCGAGCCCACCTCGAAGCTGGTGGGAAAAGCCCAGGGAATCTACGCTTCTGCTTCGCAGAACGACATGGGGTTGCTGATGGTGATGAACTTGGAGTTCTCTGAAGGCAAATACAATGGCAGCACGCTAAGCTTGCTTGGTCGGAACGCGGTGCTTCACACCATCAGGGAGATGCCCATCGTTGGTGGCAGCGGGCTTTTCCGATTCGCCCATGGCTATGCTCAGGCCAAGACTCACTGGATCAATATCACTTCAGGGGACGCCATTGTCGAGTACAATGTCTACGTGTTCCATTATTGA 576 0.5399 MAKTLTFFSTLTVLFFLFSSYVTAKQPRFYRSISPTSLGLRKEKLSHLHFYFHDIVSGPKPTAIRVAEAQVTKHSPTLFGAVVMIDDPLTVGPEPTSKLVGKAQGIYASASQNDMGLLMVMNLEFSEGKYNGSTLSLLGRNAVLHTIREMPIVGGSGLFRFAHGYAQAKTHWINITSGDAIVEYNVYVFHY* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0309 191 Gene3D - 34 184 IPR044859 -
Ahy16g0309 191 Pfam Dirigent-like protein 46 189 IPR004265 -
Ahy16g0309 191 PANTHER NUCLEOPORIN-RELATED 8 190 IPR004265 -
Ahy16g0309 191 PANTHER DIRIGENT PROTEIN 8 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0309 Ahy-Chr16 6479231 6480207 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0309 - - gmx:100816095 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0309 16 6479231 6480207 Ahy16g0309 16 6479231 6480207 ECH
Ahy16g0309 16 6479231 6480207 Ahy6g1020 6 13610745 13611793 hybridization