Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0307 ATGGCCACATCCAAAACCCTCTTCTCTATCTTCTTCATTCCCCTCCTCTTCTCCACCCTTGTCACCGCCAAACAGCCTCGTTTCGATCGAAGCCTGTCTCCAAAATCATTGGGCCTCCGTAAGGAGAAGCTTAGCCACCTCCACTTTTACTTCCACGACATTCTCAGCGGCCAAAACCCTACCGCTGTTAGGGTGGCCCAAGCTGCAATGACGGCCACGTCCCCCACGTTATTCGGAGCTGTAATGATGGCCGATGACCCCTTAACCGTTGGGCCTGAGCCCAACTCCAAGGTCATAGGAAAAGCCCAGGGGATTTATGCGTCCGCGTCACAAAATGATCTGGGGCTATTGATGGTGATGAACTTTGCATTCATGGAAGGGAAGTACAATGGGAGCACAGTGAGCTTATTGGGGCGGAATGCGGTGTTTTCCGGCGTGAGGGAGATGTCGATCGTGGGAGGGAGCGGGGTTTTCCGATTTGCACGTGGATACGCTCAGGCCAAGACTTTCTGGCTTAACACCACCTCCGGCGATGCTATTGTCGAATATAATGTCTACGTTTTGCATTATTAA 573 0.5201 MATSKTLFSIFFIPLLFSTLVTAKQPRFDRSLSPKSLGLRKEKLSHLHFYFHDILSGQNPTAVRVAQAAMTATSPTLFGAVMMADDPLTVGPEPNSKVIGKAQGIYASASQNDLGLLMVMNFAFMEGKYNGSTVSLLGRNAVFSGVREMSIVGGSGVFRFARGYAQAKTFWLNTTSGDAIVEYNVYVLHY* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0307 190 Pfam Dirigent-like protein 45 187 IPR004265 -
Ahy16g0307 190 PANTHER NUCLEOPORIN-RELATED 7 189 IPR004265 -
Ahy16g0307 190 Gene3D - 33 181 IPR044859 -
Ahy16g0307 190 PANTHER DIRIGENT PROTEIN 7 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0307 Ahy-Chr16 6467527 6468303 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0307 - - cit:102616556 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0307 16 6467527 6468303 Ahy16g0307 16 6467527 6468303 ECH
Ahy16g0307 16 6467527 6468303 Ahy6g1023 6 13658681 13659471 hybridization