Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0278 ATGAGAGGATTACAGTTACCGTTGAGCCAAACTCAGAAGGTTCGTCTCCAGAACGCTCTGCAGCAGCTGGAGTCGCTCTCCTCCAAGGTCAACTCCGATGCCTCCGTCACCGTCGCCGATTCCATTTCTGTTAACCACGAGGAAGGCGTCCTCAAGGGCCACGGAACCGCAGACATCAACGGCGACCTCGTTGCCACCCTCTGCGGCGTAGTTGAGCGCGTCAATAAGCTCGTCTATGTCCGCGCCCTGCGATCCAGGTACAAACCCGAAGTTGGAGACATCGTCATTGGACGTGTTGTCGAGGTTTCTCAAAAACGTTGGAGGTTGGAGATAAATTACAGTCAAGATGCAGTTTTGATGCTTTCTTCTATGAATATGCCTGATGGTGTCCAGAGACGGCGGACAGCTGTGGATGAACTAAATATGCGTTCAATTTTTGAAGAGAAGGATGTTGTTTGTGCTGAAGTTCGTGGTTTCCAGCGTGATGGCTTACATCTTCAGGCAAGAAGTCAGAAATATGGGAAGCTTAACAGAGGTCAACTGCTAACAGTCCCACCTTACTTAGTTAAGAGGCAAAAGCAACATTATCATCATCTTGAGCAATATGGTGTTGATTTGATACTTGGATGTAATGGATTCATATGGATTGGAGAACATATTGAAGCCAAAGATGACATGGTAGAAGATCAAGTGAGCCATTCCAATAGAAATTCAGCAAGTCTTGAAGAACAAGAGAAAAATTATACGGCATTGGAAACAAGAAAATACATATGCAGGGCTGCTAATGCTATTAGAGTATTATCTACTTTGGGTTTCAATATGACATTAGAAATCATCAAGGGAGTTATTGATTTAAGCCTTTCTCTAAATCTTGATATACATGATATGCTTGGTTCGGAGTTCTATGTTCAGGTTGCTGAAAAAGAGGCTGAAAGGAGAAGCTCAAGTAAAAAGAAGAGGTAG 963 0.4393 MRGLQLPLSQTQKVRLQNALQQLESLSSKVNSDASVTVADSISVNHEEGVLKGHGTADINGDLVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVSQKRWRLEINYSQDAVLMLSSMNMPDGVQRRRTAVDELNMRSIFEEKDVVCAEVRGFQRDGLHLQARSQKYGKLNRGQLLTVPPYLVKRQKQHYHHLEQYGVDLILGCNGFIWIGEHIEAKDDMVEDQVSHSNRNSASLEEQEKNYTALETRKYICRAANAIRVLSTLGFNMTLEIIKGVIDLSLSLNLDIHDMLGSEFYVQVAEKEAERRSSSKKKR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0278 320 Pfam KH domain 179 219 IPR004088 GO:0003723
Ahy16g0278 320 SUPERFAMILY Ribosomal L27 protein-like 44 82 - -
Ahy16g0278 320 SMART S1_6 90 169 IPR022967 -
Ahy16g0278 320 PANTHER EXOSOME COMPLEX COMPONENT RRP4 10 315 - -
Ahy16g0278 320 SUPERFAMILY Nucleic acid-binding proteins 85 176 IPR012340 -
Ahy16g0278 320 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 179 315 IPR036612 GO:0003723
Ahy16g0278 320 PANTHER PNAS-3 RELATED 10 315 IPR026699 GO:0000178|GO:0003723
Ahy16g0278 320 CDD S1_Rrp4 86 176 - -
Ahy16g0278 320 Gene3D - 88 177 IPR012340 -
Ahy16g0278 320 Gene3D - 36 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0278 Ahy-Chr16 6153657 6156143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0278 K03679 - gmx:100776358 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0278 16 6153657 6156143 Ahy16g0278 16 6153657 6156143 ECH
Ahy16g0278 16 6153657 6156143 Ahy6g1047 6 13901662 13904214 hybridization