Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0272 ATGGGTAAGATTTTCCGAGAAACCGCGAAGCCGTCCTCCAAGTCCGCATCGCCGTCTTCGTCTTCAGCTCCGGTAACGACGTCGTCTACTTCCGTCACCGAAACAGTTAGGGGGTCTCATCATTTCAAGATCACGGGGTATTCTCTCTCGAAGGGGATTGGGATTGGGAAGTACGTGGCCTCGGATACGTTCTCGGTTGGTGGGTACGATTGGGCGATCTACTTTTACCCTGATGGAAAGAGCGTTGAGGACAATGCCACCTATGTTTCTCTATTCATCGCTCTCGCCAGCGACGGCACCGACGTTAGGGCGCTCTTTGAGCTGACCCTTTTGGATCAGAGTGGGAAGGAGAGGCATAAGGTCCATAGCCATTTCGAGAGGACGCTTGAAAGCGGGCCGTACACGTTGAAGTACCGGGGGAGCATGTGGGGTTACAAACGGTTCTTTAAGAGAATGGCTCTAGAGACATCTGACTACGTTAAAGACGATTGTCTATCTGTGAATTGTAGTGTTGGTGTTGTGAGATCACGCACAGAAGGCCCTAGAATCTATTCTATAGCAATTCCACCATCCAACATTGGTGAGCAATTTGGTCAACTACTGCAAAGCGGAAGAGGAACTGATGTGAGTTTCGAAGTGAATGGAGAAATTTTTGCAGCCCATAAATTGGTAATAGCTGCACGATCACCCGTTTTCAGAGCCCAACTTTTTGGTCCTATGAAAGATCAGAATACCGATTGTATAAAAGTTGAAGATATGGAGGCTCCAGTCTTTAAGGCATTGCTTCATTTTATGTACTGGGACACTCTACCTGATCTGCACGAACTCACTGGGTTGAACACAAAATGGGCAACAACCTTGATGGCTCAACATCTTCTAGCAGCAGCCGATCGGTATGCCTTAGAGAGGCTTAGGATGATGTGTGAAGCGAGTCTATGTGAAGATGTTGCAATAAACACTGTTGCTACGACTTTAGCTTTAGCAGAGCAGCACCATTGTTTTCAGCTAAAAGCAGTCTGTCTCAAGTTTATTGCAACCACCGAAAACCTCAGAGCCGTGATGCAAACTGATGGGTTTGATTACTTGAAGGAAAGTTGCCCTTCTGTTCTGACAGAGCTATTGGAGTATGTGGCTAGATTCACTGAGCATTCGGACTTCATGTTCAAGCACAGGAATGATGTACTCCTTGATGGCAGCGACATAAATGGGAGGCGGGTGAAGCAAAGACTTTAA 1233 0.4704 MGKIFRETAKPSSKSASPSSSSAPVTTSSTSVTETVRGSHHFKITGYSLSKGIGIGKYVASDTFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASDGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRMALETSDYVKDDCLSVNCSVGVVRSRTEGPRIYSIAIPPSNIGEQFGQLLQSGRGTDVSFEVNGEIFAAHKLVIAARSPVFRAQLFGPMKDQNTDCIKVEDMEAPVFKALLHFMYWDTLPDLHELTGLNTKWATTLMAQHLLAAADRYALERLRMMCEASLCEDVAINTVATTLALAEQHHCFQLKAVCLKFIATTENLRAVMQTDGFDYLKESCPSVLTELLEYVARFTEHSDFMFKHRNDVLLDGSDINGRRVKQRL* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0272 410 SUPERFAMILY TRAF domain-like 34 173 - -
Ahy16g0272 410 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 20 389 IPR045005 GO:0016567
Ahy16g0272 410 MobiDBLite consensus disorder prediction 10 32 - -
Ahy16g0272 410 CDD BTB_POZ_BPM_plant 193 313 - -
Ahy16g0272 410 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 36 175 IPR008974 GO:0005515
Ahy16g0272 410 SMART BTB_4 207 316 IPR000210 GO:0005515
Ahy16g0272 410 CDD MATH 38 171 IPR002083 GO:0005515
Ahy16g0272 410 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 20 389 - -
Ahy16g0272 410 SMART math_3 42 154 IPR002083 GO:0005515
Ahy16g0272 410 ProSiteProfiles BTB domain profile. 207 266 IPR000210 GO:0005515
Ahy16g0272 410 ProSiteProfiles MATH/TRAF domain profile. 37 171 IPR002083 GO:0005515
Ahy16g0272 410 SUPERFAMILY POZ domain 184 314 IPR011333 -
Ahy16g0272 410 Gene3D Potassium Channel Kv1.1; Chain A 183 310 IPR011333 -
Ahy16g0272 410 MobiDBLite consensus disorder prediction 1 32 - -
Ahy16g0272 410 CDD BACK_AtBPM-like 313 376 IPR034090 -
Ahy16g0272 410 Pfam BTB/POZ domain 198 314 IPR000210 GO:0005515
Ahy16g0272 410 Gene3D - 316 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0272 Ahy-Chr16 6086181 6089636 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0272 K10523 - gmx:102668882 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0272 16 6086181 6089636 Ahy16g0272 16 6086181 6089636 ECH
Ahy16g0272 16 6086181 6089636 Ahy6g1058 6 14260975 14264039 hybridization