Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0265 ATGGCGAATCTGGTGCATTCATTCACACTGATTCCTTGCAACCCATATAAATACCGAACCAAAGTTTCATGCTTTCACAAATCCTTTAACCAGACAAAGGACCAATTCGTTATTCGAGGGTTGCAAAACCCCATTCAACCCTTTTCGCGTAATTTCACCTCAAAATTGGGTGCCACGTCAAGGTTATCCGTTGAGCATAAACTGAATGCCGTAGCTTCCGAATCTGAGGATCTGAAGAGGACGTTGAGCTATTTGTTCAGGACAGAGATTGGTGGCGGTTTGGTTAGAGTTTATGTCACAAAGAGTAATAACCACCTTAGGTATTCTGTTTTGATTGAGGTTTCTTCGTTGGATTTAAGGGTTAGTGGCCAAGGTGAAAAGAGGCTTGTGTTGTGTTGGGGTGTGTATAGAGACGATTCGTCGTGTTTTGTGGAGTTGGATTCGAAGAATTCGGGTGGGGATGCTGGGGCGGGGATGAATCTAAGCCAGTTTAAGCAGAATTCTGCTGAGAAGTTTGTGGTTGAGTTGGATTTTGATGCTAAGCAAGTTCCATTGTACTTATCATTTTATTTTAAGTCTCTGTTAGGTGATGATGAGACTAGTGGATTGGAGATCAGAAGCCATAGGAGAACAAATTTTTGTGTTCCTGTCGGTTCTCTTCCAGGATACCCAGCTCCTCTAGGTCTGTCTTTTAGTCCTGATGGTTCTATGAACTTTGCCCTTTTCTCAAGGCATGCAGAGGGTGTTGTTTTGTGTTTGTATGATGACACTGGTGTGGAGAAACCTGCCTTGGAGCTTGATCTGGATCCTTATGTCAATCGATCAGGTGATGTTTGGCATGTCGCATTTGAGAGTGCCTGGACTTTTGTGAGCTATGGTTATCGCTGCAGGGGGATCTTGGGGAGAGACAAGGATGATGATGATGCCATGCGTGTTCTTTTGGACCCTTATGCTAAGATCATTGGGAATTTTTTTCCTGATGGTCATGGATTAGTGAGGAATCTTGGACAGTTGGGGAAGGAGCCTGCTTTCGACTGGGGTGATGATTACCGTCCGAATTTGTCCATGGAAAAGCTAGTGGTCTATAGGTTGAATGTCAAGTGCTTTACGCAGGATATGTCCAGTCAACTTCCTAGTAATTTAGCCGGGACCTTTTCTGGTTTGGCTAACAAGGTGAAGTATCTCAAAGATCTGGGTGTGAATGCCATTTTGCTGGAGCCAGTTCTCACATTTGATGAGAATAAAGGACCATATTTTCCTTGTCACTTTTTCTCTTTAATGCACATATATGGGCCATCTGGTGATCCTGTGTCCACTATCAATTCTATGAAGGAGATGGTTAAAACTATGCATGCCAATGGTATAGAAGTTCTTATGGAAGTTGTGTTTGCCCATACTGCTGAGGCTGGTGCTCTGCAAGGAATCGATGACTTATCGTACTATTTTCTAAATGGAGTCGATGATCCGGATACACAGGGTGCTTTGAAATGTAACTATCCTGTAGTGCAAAGTTTGATTCTGGATAGCCTTCGTCATTGGGTGACTGAGTTTCACATTGATGGCTTCTCTTTCATAAATGCTTCTAATCTGTTGAGGGGTTCTCATGGGGAATACTTGTCTCGACCTCCATTGGTTGAAGCAATCGCTTTTGATCCAGTACTCTGGAAGACTAAAATCATTGCAGATTCCTGGGATCCCCATGGTATGGTAGCAAAGGGAACCCACTTTCCCCATTGGATGAGATGGGCTGAAATAAATACAAAATTTTGTCATGATGTGAGAAACTTCTTGAGGGGTGAAAGTCTTATCAGTAACCTCGCAACAAGACTTTGTGGGAGTGGAGACATGTTTTCTAATGGACGAGGCCCGGCATTTGCTTTCAATTATGTTGCCAGGAATTTTGGACTTTCTCTTTTGGACTTGGTCAGCTTTAGTAGTGGTGAACTAGGTGCAGAGTTGAGTTGGAATTGTGGAGAAGAAGGACCTACTAACAACGTCGTTGTGCTTGAAAGACGACTCAAACAAATCCGTAATTTCCTCTTCATCTTGTTTGTGTCCTTAGGAGTACCTGTTCTGAACATGGGAGATGAGTGTGGTCAGTCTTTTGATGGTTCTCCTGCATACAGTGTCTTTAAACCTTTCAATTGGAGTGCCTTGCAAACAGGTTTTAGCAAACAAACAACACAATTTGTTTCCTTTTTAAGTTCACTCAGAAAGAGGCGGAGTGATCTTCTTCAAAGTAGCAGCTTTTTAAAGGAAGAAAACATAGAGTGGTACGGAAGCAACCGGGATCCACCACAATGGGAAGACCCAACCTGCAAGTTCCTTGCAATGCTTCTGAAGGCAGAAAAACCAGAGCTCCCAGAAAACCCTTTACCTACTGACATATCAGGGGACTTATTTCTTGCTTTCAATGCAGCTGATAATTCAGAAACCTTAGTTCTACCTGTGCCCCCGGAAGGGATGTCGTGGTACCGTTTAGTCGATACGTCTCTTCCGTTTCCTGGTTTTTTCTTAACCGATGGTGAACTTGTCCCTGAGCAGACAGCAGGATTGTTTACTTACCTAATGAGGTCTCACAGCTGCACTTTATTTGAGACAAGCAATAAGAGAAGCTAA 2619 0.4322 MANLVHSFTLIPCNPYKYRTKVSCFHKSFNQTKDQFVIRGLQNPIQPFSRNFTSKLGATSRLSVEHKLNAVASESEDLKRTLSYLFRTEIGGGLVRVYVTKSNNHLRYSVLIEVSSLDLRVSGQGEKRLVLCWGVYRDDSSCFVELDSKNSGGDAGAGMNLSQFKQNSAEKFVVELDFDAKQVPLYLSFYFKSLLGDDETSGLEIRSHRRTNFCVPVGSLPGYPAPLGLSFSPDGSMNFALFSRHAEGVVLCLYDDTGVEKPALELDLDPYVNRSGDVWHVAFESAWTFVSYGYRCRGILGRDKDDDDAMRVLLDPYAKIIGNFFPDGHGLVRNLGQLGKEPAFDWGDDYRPNLSMEKLVVYRLNVKCFTQDMSSQLPSNLAGTFSGLANKVKYLKDLGVNAILLEPVLTFDENKGPYFPCHFFSLMHIYGPSGDPVSTINSMKEMVKTMHANGIEVLMEVVFAHTAEAGALQGIDDLSYYFLNGVDDPDTQGALKCNYPVVQSLILDSLRHWVTEFHIDGFSFINASNLLRGSHGEYLSRPPLVEAIAFDPVLWKTKIIADSWDPHGMVAKGTHFPHWMRWAEINTKFCHDVRNFLRGESLISNLATRLCGSGDMFSNGRGPAFAFNYVARNFGLSLLDLVSFSSGELGAELSWNCGEEGPTNNVVVLERRLKQIRNFLFILFVSLGVPVLNMGDECGQSFDGSPAYSVFKPFNWSALQTGFSKQTTQFVSFLSSLRKRRSDLLQSSSFLKEENIEWYGSNRDPPQWEDPTCKFLAMLLKAEKPELPENPLPTDISGDLFLAFNAADNSETLVLPVPPEGMSWYRLVDTSLPFPGFFLTDGELVPEQTAGLFTYLMRSHSCTLFETSNKRS* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0265 872 SUPERFAMILY (Trans)glycosidases 342 744 IPR017853 -
Ahy16g0265 872 CDD E_set_GDE_Isoamylase_N 226 363 IPR044505 -
Ahy16g0265 872 Gene3D Glycosidases 340 753 - -
Ahy16g0265 872 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 226 318 IPR004193 GO:0004553|GO:0005975
Ahy16g0265 872 Pfam Alpha amylase, catalytic domain 383 470 IPR006047 GO:0005975
Ahy16g0265 872 Gene3D Immunoglobulins 214 329 IPR013783 -
Ahy16g0265 872 PANTHER ISOAMYLASE 2, CHLOROPLASTIC 57 870 - -
Ahy16g0265 872 Gene3D - 754 872 IPR013780 -
Ahy16g0265 872 SUPERFAMILY E set domains 221 352 IPR014756 -
Ahy16g0265 872 CDD AmyAc_plant_IsoA 355 746 IPR044096 GO:0019156|GO:0019252
Ahy16g0265 872 PANTHER GLYCOGEN DEBRANCHING ENZYME 57 870 - -
Ahy16g0265 872 SMART aamy 367 741 IPR006047 GO:0005975
Ahy16g0265 872 SUPERFAMILY Glycosyl hydrolase domain 753 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0265 Ahy-Chr16 6010148 6013460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0265 19 869 Glycoside Hydrolase AT1G03310 54.186 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0265 K01214 - gmx:100777953 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0265 16 6010148 6013460 Ahy6g1063 6 14327142 14330346 hybridization