Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0227 ATGGAAGCAACAACAACAACTACTACTACTACTACTACTAGTACTACTACTCATCATGTAATATCTATTGTGAATGGAGGAGAAGAGAGTGTTGGTGAGAATAATAATAGTAAGGAAAAGAGTAGAGTAGGGAAGTTGTTATCTCTTGTCCACATTGCTAGTTGTTGTTGCTATGTGAATTTGGACACAAGGAAGACAATCCACAGCATCAAAGTGGGAGTTTCATTGGTTTTGGTGTCACTATTTTACCTCTTGAACCCTCTCTTTGATCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTTGTTGTCACCTTTGAGTTCTATCCAGGAGCAACACTGGGAAAGGGCATCAACCGTGGATTGGGAACTATATTAGGAGGTGCAATGGGTGTCCTAACAGCAATTTTTGCCCAAACCATTGGAGGGATTGCTAACTCTATTACCATCGCTATTCTTATTTTTGTCTCCGGATCAGTTGCTACATATTTTCGACTGGTTCCAAGCATAAAGAAAAGATACGACTATGGAGTGATGATATTCATACTCACATTCAACCTGGTAGCGGTGTCTGGAGTGCGTGTTGAAGACCCTGTTTGGGAAATAGCACGTCAGCGTCTCTTAACCATTCTCATGGGTTTCATAGTCTGTCTTTGTGTCAACATCTTCGTTTTTCCCTTGTGGGCCAGTGACGAACTTCATCATTCTCTTGTAACTACCTTTTTCAACCTTGCCAACACAATTCAACGGTGTTTGCTGGAAGAAGAAGAAGATGCCAAATTCGTTACTGAAAAAGAAAAAGAAAAAGAAAAGGAATCATCATCCGCTGTTAATAACAAATTCTCTCTTTGTAATTCTGTCTTGGACTCCAAGTCAAAACATGAACTATTGGCAAATTTCGCAAAATGGGAACCTTGGCATGGGAAATTCGGATTTTCGTACCCTTGGGAGAAGTACTTGAAGATTGGACAAGTTCTTCGAGAACTTGCTGCATTTATTCTTACAGTTGGAAATTGCCTTCAAGCATCAAAACAGGTAGGTATATATAAAAGGTACATGTGCAAATTTAGCTTAGCCATGGCATTATTGAGGGAATCACATTCAATCCAATTAGAATCATGGGAAGCAATTGGGTCAAAGGTTTCATGGGCTCTTAGAGAACTTGGAGATAGCATGAAAGAAATGAGGAAATTGGAGGATGATAGCAATAGCATTTCCACAAAGTTGAAAGCAGCAAAAGCAGAACTAAGCCTTGTAATCTCCATGTCCAAGGTTTCATCTCTTGATAATGGCGAAGTTCTAGCAATTGCAAGCTTTGTGTTATTGCTCTCTCAAGTGTTGGACAAGGTTGACCAATTGGTCAAAGAAGTTGATGAACTTGGACATCTTGCTGCTTTTCCTACTCATTAA 1413 0.397 MEATTTTTTTTTTSTTTHHVISIVNGGEESVGENNNSKEKSRVGKLLSLVHIASCCCYVNLDTRKTIHSIKVGVSLVLVSLFYLLNPLFDQVGENAMWAIMTVVVTFEFYPGATLGKGINRGLGTILGGAMGVLTAIFAQTIGGIANSITIAILIFVSGSVATYFRLVPSIKKRYDYGVMIFILTFNLVAVSGVRVEDPVWEIARQRLLTILMGFIVCLCVNIFVFPLWASDELHHSLVTTFFNLANTIQRCLLEEEEDAKFVTEKEKEKEKESSSAVNNKFSLCNSVLDSKSKHELLANFAKWEPWHGKFGFSYPWEKYLKIGQVLRELAAFILTVGNCLQASKQVGIYKRYMCKFSLAMALLRESHSIQLESWEAIGSKVSWALRELGDSMKEMRKLEDDSNSISTKLKAAKAELSLVISMSKVSSLDNGEVLAIASFVLLLSQVLDKVDQLVKEVDELGHLAAFPTH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0227 470 Coils Coil 253 273 - -
Ahy16g0227 470 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 18 468 - -
Ahy16g0227 470 Coils Coil 396 416 - -
Ahy16g0227 470 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 18 468 - -
Ahy16g0227 470 Pfam Aluminium activated malate transporter 62 462 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0227 Ahy-Chr16 2495027 2498277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0227 62 347 Miscellaneous Gene Families AT1G08440 43.945 2.21e-80 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0227 - - ahf:112758020 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0227 16 2495027 2498277 Ahy16g0227 16 2495027 2498277 ECH
Ahy16g0227 16 2495027 2498277 Ahy6g1093 6 15749746 15752530 hybridization