Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0196 ATGAAGATGATGCTATCATCAGCAATAATAACTACCTTTTTGTTGATGACTTCAACAATGAAAATGGTTGATTGTCAGACTCAGAATAGCATAGCATGCACAATCTCCATGATGAGCAGCATCACCCCATGCGCCAACTTCATCACCGGAAGCGGCAACAACAACGGCGGTGTGACGCCGCCATCAAGCACGTGCTGCGATTCATTGCGCGCTCTGATGAGTTCAAGCATGGATTGTGCTTGCAAGGTTTTATCTGCAAATGCTCCAAATCTCCAACTTCCCATCACACAAGCTGTTGCCATCTCCCTTGCAACCGCATGCAATATTAATGGACTCTCCGCACACTGTAAAGGAGAGGTGGTGGAAGCAGAATCGGCGGCAAAAACACCGTGA 393 0.4733 MKMMLSSAIITTFLLMTSTMKMVDCQTQNSIACTISMMSSITPCANFITGSGNNNGGVTPPSSTCCDSLRALMSSSMDCACKVLSANAPNLQLPITQAVAISLATACNINGLSAHCKGEVVEAESAAKTP* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0196 130 PANTHER LIPID TRANSFER PROTEIN 6 120 - -
Ahy16g0196 130 Gene3D - 31 116 IPR036312 -
Ahy16g0196 130 SMART aai_6 33 116 IPR016140 -
Ahy16g0196 130 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 113 IPR036312 -
Ahy16g0196 130 CDD AAI_LTSS 41 109 - -
Ahy16g0196 130 Pfam Probable lipid transfer 23 114 IPR016140 -
Ahy16g0196 130 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 6 120 IPR043325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0196 Ahy-Chr16 2064260 2065284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0196 10 117 Lipid Metabolism Gene Families AT2G48140 39.815 1.23e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0196 - - adu:107493009 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0196 16 2064260 2065284 Ahy6g1126 6 16504613 16505026 hybridization