Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0191 ATGTCTTCGTCGTTGATGAAGGATTTTCTCCGCACCACCGGTGGTACGGCAGTCATCGACGGCGGACTTGCGACGGAGCTGGAGCGTAAGGGCGCCGACCTCAACGATCCTCTTTGGAGCGCCAAATGCCTCCTTTCCTCCCCTCACCTCATTCGCGAGGTGCACCTTGATTACCTGGAAAATGGTGCAGATATTATAATCACAGCATCTTATCAGGCCACTATTCAAGGCTTTAAAGCAAAAGGCCTTTCTGACAAAGAAAGTGAAGACTTGATCAGAAAAAGTGTTGAAATTGCTCGGGAGGCCAGAGATGTGTACTATGAAAGATGTGCTGCATGCTCTTCAGGTATCGATGCTGATGGTAGAATCTTCAAGAAACGCCCTATTCTAATCGCAGGTTCAGTGGGGAGCTATGGAGCTTATTTGGCTGATGGGTCAGAGTACAGTGGGGATTATGGTGACGCTATAACCTTGAAATGTCTCAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGATTCTGGTGCTGATCTCCTCGCATGTGAAACAGTGCCAAATAAGCTTGAAGCTAAGGCTTATTCAGAGCTTCTAAAAGAAGAGGACATAAGTATTCCAGCATGGTTTTGTTTTAACTCCAAGGATGGAATTAATGTTGTTAGTGGTGATTCTTTGGAGGAGTGCATTTCTATTGCTGAATCATGCAGCAAGGTTGTTGCTGTTGGGATCAACTGTACCCCGCCCAGATTTATACAAGACCTGATAGTATCTGTTAAGCAGGTGACTACAAAACCAATTGTTATATATCCAAACAGCGGGGAAACTTACGATGGTATCCAAAAGCAGTGGGTGAAAAATACAGGGGTTACAGATGAAGATTTTGTCTCATATGTGAACAACTGGATTGAGTCAGGGGCTTCCCTTGTGGGTGGTTGTTGCAGAACAACCCCGGCTACTATCAAAGGGATATACACCACACTCTCAGTTAGTCGATCAGTGAATCTTGCAGAGGACTCAGAAGCATCTGATCAGAAAATCTTGCAAGAGAATGTCCGCTGA 1059 0.4485 MSSSLMKDFLRTTGGTAVIDGGLATELERKGADLNDPLWSAKCLLSSPHLIREVHLDYLENGADIIITASYQATIQGFKAKGLSDKESEDLIRKSVEIAREARDVYYERCAACSSGIDADGRIFKKRPILIAGSVGSYGAYLADGSEYSGDYGDAITLKCLKDFHRRRVQILADSGADLLACETVPNKLEAKAYSELLKEEDISIPAWFCFNSKDGINVVSGDSLEECISIAESCSKVVAVGINCTPPRFIQDLIVSVKQVTTKPIVIYPNSGETYDGIQKQWVKNTGVTDEDFVSYVNNWIESGASLVGGCCRTTPATIKGIYTTLSVSRSVNLAEDSEASDQKILQENVR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0191 352 Gene3D - 6 324 IPR036589 -
Ahy16g0191 352 Coils Coil 346 352 - -
Ahy16g0191 352 PIRSF BHMT 7 262 IPR017226 GO:0008168|GO:0008270|GO:0009086
Ahy16g0191 352 PIRSF BHMT 280 344 IPR017226 GO:0008168|GO:0008270|GO:0009086
Ahy16g0191 352 Pfam Homocysteine S-methyltransferase 18 324 IPR003726 -
Ahy16g0191 352 ProSiteProfiles Homocysteine-binding domain profile. 5 327 IPR003726 -
Ahy16g0191 352 SUPERFAMILY Homocysteine S-methyltransferase 13 328 IPR036589 -
Ahy16g0191 352 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 332 - -
Ahy16g0191 352 PANTHER ZGC:172121 2 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0191 Ahy-Chr16 2014286 2017981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0191 K00547 - gmx:100790567 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0191 16 2014286 2017981 Ahy16g0191 16 2014286 2017981 ECH
Ahy16g0191 16 2014286 2017981 Ahy6g1131 6 16570419 16574044 hybridization