Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0053 ATGCATGGGCAGTGGAGCCCAAACAGTGTCACAACCTCCATTCTTCTCTTACCAATGGCTTCCTTATTGTTTTCCTATTACTGTTTCTCTTCACACATTGCAATCATCTTGTTTCTATTTTGCTTCGATAAAGGAGCATTAGGGGCCAAGTTTACAATAATTAACAAGTGTGATTACACGGTGTGGCCTGGGATTCTTGCCAATGCTGGCAGCTCCGCATTGGATACCACCGGCTTCCACCTCCCATCCGGCGGGTCGAGGAGCTTTCAAGCCCCACCCAATTGGTCAGGCAGGTTTTGGGGCCGAACCGGCTGCAATTTTGACCCCAATACCCAACAGGGCACCTGCACCACAGGGGATTGTGGCTCCAACCAACTTGAATGCAATGGTTCCGGGGCAGACCCACCCGTAACACTAGCCGAGTTCACAATCGGGTCGGGTTCCCAATCCCAGGATTATTACGACGTCAGCCTGGTTGATGGATACAATCTACCTATGATGGTGGATGCGGGTGGCGGGTCGGGTGAATGTGGGTCAACGGGTTGCGTAGCTGACCTGAACCGGCAATGCCCGAATGAGTTGAGGGTTAGTAACCGAGTGGCATGCAAGAGCGCGTGTGAAGCGTTTCAGAGGGCTGAATACTGCTGCAGCGGCACCTACGCTTCACCTGCCACATGCAAGCCTTCGGTTTACTCCACAATGTTCAAGAGCGCGTGCCCCAAATCGTATAGCTACGCATACGACGACCCTACGAGTACGTTTACGTGTACGGGAGCTGATTATACCATCACATTCTGCCCTTCAACCACAAGCCAAAAATCAGCAAGAGTGTCACCACCTGAAACAGGAACAGGGGAGATGCCTATGATAGTGAACAGTTCATGGTTCTCTGATATTTTTTATGGACTCTCGCCCAAGTCCTACTCTTCCCCAACCTTACTCATTGCCACTCTCACTATCCTAACTTTCCTCAATTTGCAATCCTCATAG 990 0.5071 MHGQWSPNSVTTSILLLPMASLLFSYYCFSSHIAIILFLFCFDKGALGAKFTIINKCDYTVWPGILANAGSSALDTTGFHLPSGGSRSFQAPPNWSGRFWGRTGCNFDPNTQQGTCTTGDCGSNQLECNGSGADPPVTLAEFTIGSGSQSQDYYDVSLVDGYNLPMMVDAGGGSGECGSTGCVADLNRQCPNELRVSNRVACKSACEAFQRAEYCCSGTYASPATCKPSVYSTMFKSACPKSYSYAYDDPTSTFTCTGADYTITFCPSTTSQKSARVSPPETGTGEMPMIVNSSWFSDIFYGLSPKSYSSPTLLIATLTILTFLNLQSS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0053 329 PIRSF PR5 3 299 IPR001938 -
Ahy16g0053 329 PRINTS Pathogenesis-related protein signature 50 62 IPR001938 -
Ahy16g0053 329 PRINTS Pathogenesis-related protein signature 98 109 IPR001938 -
Ahy16g0053 329 PRINTS Pathogenesis-related protein signature 257 266 IPR001938 -
Ahy16g0053 329 PRINTS Pathogenesis-related protein signature 152 168 IPR001938 -
Ahy16g0053 329 CDD TLP-PA 50 266 - -
Ahy16g0053 329 Pfam Thaumatin family 55 267 IPR001938 -
Ahy16g0053 329 Gene3D Thaumatin 49 267 IPR037176 -
Ahy16g0053 329 SUPERFAMILY Osmotin, thaumatin-like protein 50 268 IPR037176 -
Ahy16g0053 329 SMART tha2 51 267 IPR001938 -
Ahy16g0053 329 PANTHER THAUMATIN-LIKE PROTEIN 1 33 276 - -
Ahy16g0053 329 ProSiteProfiles Thaumatin family profile. 48 267 IPR001938 -
Ahy16g0053 329 PANTHER OS03G0233200 PROTEIN 33 276 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0053 Ahy-Chr16 482349 485680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0053 29 304 Receptor kinase-like Gene Family AT5G38280 45.263 4.05e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0053 - - gmx:100786772 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0053 16 482349 485680 Ahy15g0405 15 4713222 4714968 ECH
Ahy16g0053 16 482349 485680 Ahy16g0053 16 482349 485680 ECH