Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0048 ATGATTGTTGCAGATGGAATCGACGATGAAGAGAAGTGGCTGGCGGAGGGCATCGCCGGCGTTCAACATCACGCTTTCTTCATGCACCGCGCCCTCGACGACAACAATCTCAGGGACGCTTTAAAATACTCCTCGCTAATGCTTTCCGAGCTTCGAACTTCGAGGCTCTCCCCTCACAAATACTATGAACTGTATATGAGAGCGTTCGACGAGCTTAGGAGGTTGGAATTGTTCTTCAAAGACGAGAGCAGGCATGGCGTTTCCATTTTTGATCTCTACGAGCTTGTTCAGCACGCTGGAAATGTATTGCCTAGATTGTATCTCCTTTGCACAGTGGGGTCGGTGTACCTCAGGTGTAAGGATGCTCCTGTGAAGGATGTTCTTAAGGATCTGGTGGAAATGTGTCGTGCGGTTCAGCACCCAATTCGCGGCCTGTTTTTGAGGAGTTACCTTGCTCAAATCAGCAAGGATAAGTTACCCGATATTGGCTCTGAATATGATGGAGAAGGGGATTCGGGCAATGTCATGGATGCTGTTGAATTTATCCTACAAAATTTCATGGAAATGAATAAGCTTTGGGTTCGATTGCAACATCAGGGACCTGGTCGGATAAGAGACAAGAGGGAGAAAGAAAGAAATGAGCTTCGCGATCTTGTTGGAAAGAATCTTCACATTCTCAGTCAGATAGAGGGTGTGGACCTTGAAATGTACAAAGACACTGTCCTTCCGAGTGTCTTAGAGCAGGTTGTCAATTGTAAAGATGAGCTTGCCCAATTTTACCTCATGGAGTGCATAATCCAAGTTTTCCCAGATGAGTACCACTTGCAGACTCTTGAGACACTTCTTGGTGCTTACCCCCAACTGCAGTCAACAGTAGACATCAAGACCATACTATCTCAGTTAATGGACAGGTTATCAAATTATGCTGCTTCAAATGCTGAAGTGCTGCCCGAATTTCTGCAAGTGGAAGCTTTTACCAAACTAAGCACAGCAATAGGCAGGGTGATAGAAGCACAGGCTGACATACCTATTGTTGGAGCAATATCTTTGCATGTCTCTCTTCTGACATTCACTCTCCGTGTTCATCCTGATCGGCTTGATTATGTGGACCAAGTGCTGGGATCATGTGTCAAGAAGCTTTCTGGAAAACCAAAGCTTGATAATAGAGCAACGAAGCAAGTTGTTGCACTTTTAAGTGCTCCACTGGATAAATACAATGATATTGTGACAGCCCTTAGACTTTCTAATTATCCGCGTGTAATGGATCATCTTGATAACCAAACAAATAAAGTGATGGCTATGCTTATTATCCAAAGTATTATGAAGAATAACACTCTCATATCTACTGCTGATAAGGTTGAAGTTTTATTTGAATTAATAAAAGGGCTTATTACAGATTTGGATGCCACAACTGTGGATGAGGTTGATGAAGAAGATTTCAGCGAAGAACAAAATTCTGTTGCTCGGCTCATACACATGCTTCATAACAATGATCCAGAGGAAATGTTTAAGATAATATGTAGTGTAAAGAAGCACATTATGAGAGGAGGACCAAGGCGTTTACCTTTCACAGTTCCTTCCCTTATTTTTTCTGCACTTAGGTTGGTCAGGCAATTACAAGGACAAGATGGAGATGTTGTGGGTGAAGAAGTTCCAACGACACCAAAAAAGATATTTCAGCTTTTAAATGAGATCATTGAAGCCCTTTCTTCTGTATCATCTCCCGAACTGGCCTTGAGATTGTACCTGCAATGTGCTGAGGCTGCTAATGACTGTGACCTTGAGCCTGTTGCATATGAGTTTTTCACCGAAGCATTTGTGTTATATGAAGAAGAAATTGCGGACTCTAAAGCCCAGGTAACTGCAATACATCTTATTATTGGGACACTTCAGAGGATGAACGTCTTTGGAGTCGAGAACAGGGATACGTTAACTCATAAGGCCACAGGGTATTCGGCAAAGCTTTTGAAGAAACCTGATCAGTGCCGAGCAGTTTATGCGTGCTCACATCTCTTCTGGGTCGATGATCAAGATGGTATTAAAGATGGAGAGAGGGTATTGCTTTGCCTTAAGCGTGCATTGAGGATCGCAAATGCTGCGCAGCAAATGGCCAATGTAGCAAGGGGTAGCAGTGGTCCAGTAACGCTATTTGTTGAAATACTAAACAAGTACATATACTATTTTGAGAAAGGAAACCCACAAATCACAAGTGCAACGATTCAGGGGCTGATAGAATTAATCACAACCGAGATACAAGGTGATTCTACATCTGCTCTTCCAACTTCGGATCCCTTCTTTACAAGCACATTGCGGTACATACAATTCCAAAAGCAGAAAGGTGGTATACTGGGTGAGAAATATGAATCTATCAAGGTCTGA 2379 0.4288 MIVADGIDDEEKWLAEGIAGVQHHAFFMHRALDDNNLRDALKYSSLMLSELRTSRLSPHKYYELYMRAFDELRRLELFFKDESRHGVSIFDLYELVQHAGNVLPRLYLLCTVGSVYLRCKDAPVKDVLKDLVEMCRAVQHPIRGLFLRSYLAQISKDKLPDIGSEYDGEGDSGNVMDAVEFILQNFMEMNKLWVRLQHQGPGRIRDKREKERNELRDLVGKNLHILSQIEGVDLEMYKDTVLPSVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGAYPQLQSTVDIKTILSQLMDRLSNYAASNAEVLPEFLQVEAFTKLSTAIGRVIEAQADIPIVGAISLHVSLLTFTLRVHPDRLDYVDQVLGSCVKKLSGKPKLDNRATKQVVALLSAPLDKYNDIVTALRLSNYPRVMDHLDNQTNKVMAMLIIQSIMKNNTLISTADKVEVLFELIKGLITDLDATTVDEVDEEDFSEEQNSVARLIHMLHNNDPEEMFKIICSVKKHIMRGGPRRLPFTVPSLIFSALRLVRQLQGQDGDVVGEEVPTTPKKIFQLLNEIIEALSSVSSPELALRLYLQCAEAANDCDLEPVAYEFFTEAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSATIQGLIELITTEIQGDSTSALPTSDPFFTSTLRYIQFQKQKGGILGEKYESIKV* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0048 792 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 3 792 - -
Ahy16g0048 792 PANTHER VACUOLAR SORTING PROTEIN 35 3 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Ahy16g0048 792 PIRSF Retromer_Vps35 3 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Ahy16g0048 792 Pfam Vacuolar protein sorting-associated protein 35 13 749 IPR005378 GO:0015031|GO:0030906|GO:0042147
Ahy16g0048 792 Gene3D - 468 777 IPR042491 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0048 Ahy-Chr16 431716 437484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0048 K18468 - gmx:100775573 1416.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0048 16 431716 437484 Ahy16g0048 16 431716 437484 ECH