Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0047 ATGCAGCAAGGAGATTACACCTCCACTCCATACTATCAATTCCCTCATCTCCCAAATTCCAATCCCAATCCCAACCCTAACCCTAATTCCGATCCACACTCAGCCCCTTACGCATCCGCACCACCCTTCTCCTCCGGTTACGCTCCCTCCGATTACACCTCTTACTACCCTACATATCCCCCAAATCCCGATCCTACCCCTGCCCCACCGCCACCCCCTGTCCCTGCCCCTGCCCCTCCCTCCCCCACTGCTCCTTCCTTCACCAATTTCCCTTCCTTCAATTCTCCATCCTTTGACTCTCACCTCTCGTACCAACAACCACCGCCACATCAGCATCAACCACCACCACAACAGCAACCTTATTATCCACCTTTCGATCAGCATCAAGCGGCTCCATCTCCGATCTACGCTCCTCCTCCACCACCACCACCCTCCGTTACGCCACCGTACTCCGCACCGTATAGCCACGCTGGATCTACGGTCCCTCCAGCTCCCTCCGCATACGATCCACCCTACGATAACAGTCCCGCCAAGTTCGATCACTCTGGCGCTTTCTTTGACGACGGCTACAACAACTTTAACCGTAGTAACCGTTCCGATTCGTATGGTAACCGACACGATGACGGTTTCAGCGGGTTTAACCGTGGTAATCATCGTTCTGATTACCGCGAGGAGGTGTACGGGGATGGCGTGTACGCTTACGAAGGAGGGAAGGTGGAACCGTACGGGTCTCGTGGAACCGCACCAAAATCGTCGACTTGGTCCGGTTTCGATGATTACGGGAGAGCGATCAGTCTTCCAACGGCCGCAAAGGAACCTTCCGGTGGAAGCAAGATTGTGAAGGCAGTGCCGAAGGTGGAGACGCGAGAGGATCCCGGAAGCGGGGTGCAGAAGTTCCGGGTGAAGCTCTTGGCGGAGAGTGGTGGCCAGAGCACCATGGATGTTCTGTGTCAGATTGGTTTGGATGGAATTCGAATGCTGGAACCAAATACTAGTCGAACATTGAGAATATATCCTCTTGAGAACATAACAAGATGTGAGAGGTTTGATTCATCTACCCTTGCATTCTGGTCAAAGAGCCCAGTGGACATTGAGCCACGACGAATCAGATTGCAATCCAATAGTTACACTACCAACACACTTTTGGATACTGTGACTGCTGCCACCATACAGTACAAGGAAATGGGTGGAAGCAAAAGACCCACAGAATCGTTAAGAACTAATGAACAGCCTGCAGAAAAAAGGAAAGGATTTGGTGATTGGATGAATTTGATTAAACCTCCCAATGAAGAGAAGGATCATTGGGTCCCAGATGAAGCAGTCTCGAAATGTACAGCATGTGGCACTGATTTTGGAGCTTTCAATCGCAGGCATCACTGTAGAAATTGTGGAGATATTTTCTGTGATAAATGTACACATGGTAGAATTGCTCTAACTGCTGACGAGAATGCTCAACCAGTACGTGTTTGTGACCGATGCATGGCAGAAGTGACTCAGAGACTGAGTAATGCTAAAGAAGCAGCAAATAAACCAGTGTTGCAAAGTCATGAGGATCTTGCCAGGAAACTTCAGGAGGAGCTGGAGAGGAATCGAAAGGCATCAGGTTCCAAGTCTGAAGGATCTGGAAGACGGATGAAGGAAGTTGCATGTCCTATTTGCACTGTCCATCTGCAGGTCCAGGTACCCAGCTCAGGTTCAGAGACCATAGAGTGTGGAGTTTGCCAGCACCCATTTCTTGTGAGTGCTCATTGA 1752 0.504 MQQGDYTSTPYYQFPHLPNSNPNPNPNPNSDPHSAPYASAPPFSSGYAPSDYTSYYPTYPPNPDPTPAPPPPPVPAPAPPSPTAPSFTNFPSFNSPSFDSHLSYQQPPPHQHQPPPQQQPYYPPFDQHQAAPSPIYAPPPPPPPSVTPPYSAPYSHAGSTVPPAPSAYDPPYDNSPAKFDHSGAFFDDGYNNFNRSNRSDSYGNRHDDGFSGFNRGNHRSDYREEVYGDGVYAYEGGKVEPYGSRGTAPKSSTWSGFDDYGRAISLPTAAKEPSGGSKIVKAVPKVETREDPGSGVQKFRVKLLAESGGQSTMDVLCQIGLDGIRMLEPNTSRTLRIYPLENITRCERFDSSTLAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAATIQYKEMGGSKRPTESLRTNEQPAEKRKGFGDWMNLIKPPNEEKDHWVPDEAVSKCTACGTDFGAFNRRHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAEVTQRLSNAKEAANKPVLQSHEDLARKLQEELERNRKASGSKSEGSGRRMKEVACPICTVHLQVQVPSSGSETIECGVCQHPFLVSAH* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0047 583 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 438 498 IPR017455 -
Ahy16g0047 583 SMART fyve_4 430 499 IPR000306 GO:0046872
Ahy16g0047 583 MobiDBLite consensus disorder prediction 87 107 - -
Ahy16g0047 583 MobiDBLite consensus disorder prediction 17 31 - -
Ahy16g0047 583 Pfam FYVE zinc finger 434 498 IPR000306 GO:0046872
Ahy16g0047 583 MobiDBLite consensus disorder prediction 1 16 - -
Ahy16g0047 583 MobiDBLite consensus disorder prediction 108 122 - -
Ahy16g0047 583 MobiDBLite consensus disorder prediction 133 150 - -
Ahy16g0047 583 Coils Coil 513 533 - -
Ahy16g0047 583 MobiDBLite consensus disorder prediction 1 205 - -
Ahy16g0047 583 CDD PTB 280 346 - -
Ahy16g0047 583 PANTHER PROTEIN FREE1 1 583 IPR045893 GO:0036258|GO:0043130
Ahy16g0047 583 PANTHER PROTEIN FREE1 1 583 - -
Ahy16g0047 583 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 425 503 IPR013083 -
Ahy16g0047 583 SUPERFAMILY FYVE/PHD zinc finger 433 504 IPR011011 -
Ahy16g0047 583 MobiDBLite consensus disorder prediction 56 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0047 Ahy-Chr16 426205 431576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0047 416 511 EF-hand Containing Proteins AT3G14270 33.043 6.26e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0047 - - lang:109354905 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0047 16 426205 431576 Ahy16g0047 16 426205 431576 ECH