Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0008 ATGATGTCGTGCAAAGCGGAAGTAAAGGAGAAAATGAACTCTGCAGCAAAACCTAACCGCAGGAATGGCAATCATCTCCCGAAGAATGTGTACCACATCGGAGGCCTGCAGGTGGAGTTTCCGTACCAACCGTACGGGTCCCAGTTTGCATTCATGGGGAGAGTGATCTCCACCCTCGACCGGGCTCAGAGGGAAGGCCACTGCCACGCCTTGCTCGAGTCTCCAACTGGCACCGGCAAGTCCCTCTCCCTCCTCTGTTCCTCTCTCGCCTGGCAGCACCGTTACAAATCCCAACCCAAGCCCCCTCCGCCTTCCGAGCCCCTTGCCGATCCTCTCGTCCACGGCGGCGGCTTTCTTCCCGAGGATGATGCCTTTTCTTCTCCATCCGATAATCCGGAGCTCGCAGAAGCCGAACCAGCCAAAAAAAATCAGAAGAAAAAGGCCGCTCCTACTATATATTATGCCTCGAGAACTCACTCACAAATCTCTCAAGTCATTCGTGAACTGCGGAAAACTACATACAGGGTGCCGATGGCTGTATTGGCATCACGGAAACATTACTGCACCAATAAAAATATACTTGGCAAAGAGAACATCAATGAAGAATGTAAACTACTTCTGAAAGACCAGGAGATAGGGTGTCCAGAATTCAAAAATGCACATAAAGTCAAAGGACATCCCTCTCTTCAGAAAGGAGGATGTAATGAGGTGCATGACATAGAAGATCTTATAAAAGTTGGACATTCAGTGAAAGGTTGCTCCTATTATGCTGCACGTAATATGTCAGATGATGCGCAGCTGGTATTTTGTCCTTATAGCTACATCATTAATCCTGTCATTCGGGGAGCAATGGACTTAGATATTAAAGGAGCTATACTGATTCTTGATGAAGCTCACAATATAGAGGACATCACTCGAGATGCTGGCAGCGTGGATATTCAAGAGGATGATTTTGATAAACTGCAAATGGAGCTCCAGCAACTATGTTCTGTAAATGCTGCAATATACCAACCACTATATGAAATGGCACAGGGTCTTACTAGTTGGATAGAACGGAAGAAAAATAACCTAGACAAGCGTGATTTTCAGCACTATGTGTCATGTTGGACTGGTGACAAGGCATTGAGAGAACTTGAAGAAGCAAATATATCAAAACAGTGCTTCCCAATCTTACTAGAATGTGCTACTAAGGCAATCAGAATTGCTACGGACTTGGAGACAGATAAGCCACATTTAAGTGGCATGTCAGTGATAACATTGGAAGGTTTATTCTCATCACTAACTTATTTCTTCTCAAGAAACGGATCTCACATGTTGGATTACCAGCTTGCTCTGCAGCGATGTGTTAGAAAAGATGCTGTAAGAGCTTTTGGAAACTGGACACACACTTTCAGCTTGTGGTGCTTGAATCCAGCTGTTGTGTTTAGAGATGTTGCTGATCTTTCTTTATCGATTATCTTGACTTCTGGGACTCTATCGCCGATGAGTTCCTTTTCTTCTGAGCTTGGAGTTCAGTTTGAAACTAATCTTGAAGCCCCCCATGTAATTGACATTTGCACACAGGTGTGGCCTGCTGTAATCTCCACTGGTCCTGGTAATTATCCTTTGAATGCAAGTTATAAAACGGCAGATGGATATGCCTTTCAGGATGCAGTTGGAAGATCTTTAGAAGAAATCTTCAACATTGTTCCAGGTGGATGTCTTGTGTTCTTCCCAAGTTATAAATTGATGGAGAAATTATGCAACCGTTGGACTGAAACAGGTCAATGGTCTCGACTAAATGCAAAAAAGCCCCTTTATGTTGAACCACGAGCTGGAGGCCAAGATGATTTTGAGACTACCTTAAAAGGGTATTATGACTCGATTCATCATGGGAAAAAGCTTGGTGCGCGAAGGAAAAGAAGGATTAAAGAAGTTGATTCAAATCACTCCCATCCGGTTGATTCCCAAGAGGGTTTTGAGAAAGGAGGAGCTGCTTTACTTGGTGTTTGCCGTGGAAAGGTTTCCGAAGGGATTGATTTCTCTGATGATAATGCCAGAGTAGTTATTATTGTTGGTATTCCATTTCCCAACATAAATGATATTCAAGTTTCTCTAAAGAAAAAATATAATGATATGTACAAATCATCCAAAAATCTTCTCAGCGGAAGTGAGTGGTATTGTCACCAAGCATTCCGTGCTTTAAATCAAGCAGCAGGGCGTTGTATACGACATAAGCTTGACTATGGGGCAATAATCCTTTTGGATGAACGTCTTCGTGAAGAAAGAAGTAGAGCATTCATTTCGAAGTGGCTAAGAAGAAACCTAAAGGTTTATGACAACTTCGAATTATCAATAGAAGGACTAAAATCATTCTTTGAGGATGCCAAGGAATGGCATGCAATGAATACAGTGAATGTCAAACAGAATTTGAGCTTACATACCGATGGTGTCAATATCAAGGGTCAGAATAAGAGATTCACAAGAAAGAAAAATCAGAAACTTAACAAATCTTGCAATGGATTTGAGAAAGAAGGGTCAATTATTGAGGACCATGGCTCTTTTCCTGTACTAAGCTGTCAAGATCTTGTTGACAGTCAACCATCAGCTCAAGGGAATAGTAACAAATACAATTGTGAAGACCATATAAACCCACAAATCTGTAATCTGACGGAGGAAAGGTTCAATCGGGACTTATTTGTTGCATCCACGCTTGGAGAATGCTCCTCCATCAAGGAAACCCCTTGTATAGATGTTAACAGTGATCCAGGTAGCCCTGGTTTCTCTAAGGATGATAACTCTGTTTCCACCATAATTGAGGCCTCTGCTCAATTTTCAAATCACTTATCAAGCTTATCAGTGTGTTTACCTGATGGAAGTAAAAATTCCTCAGGGCTTCACTCTTCAGTAACTGTTACTCCTGAAAAGAATATAGCTAGAAATAATGTTCCTGAAACAGAATCACCTGTGAATACAAGTGTTAATTCTCACTACCAGAAAAGGAGGAAGACCATGCTCTCACCATTTATCACAGAGGGTATTTGGTGTGTGGAAGATGGGTGTGTCTTCAGCTCTGTTCTCTGCCCCTTCTGCAGTGACCGCAACAATTTACTAGGAGTTCAGATCATTGCAACCAATTCATCAAATATTCAGTTACTTGAAAAGATACTGTTTTACTATGATTCTTTAGAGGTGAAGAGCTATGAGGAATCAGCGTCTGGTGTTTCCAAGGATGTGGATTTGAAGCCAGTTAATGTGAATGATCGAGGCATGAATGGAATTGCTGTGTTAAGTTCCATTGACAAGTATTCTTATGTTCCCCGGCCAAAGATTTCAGAACAGAGACTAAGGGGCTTGCCTTCTGAGGAAAACCAAAGTTGA 3360 0.4217 MMSCKAEVKEKMNSAAKPNRRNGNHLPKNVYHIGGLQVEFPYQPYGSQFAFMGRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQHRYKSQPKPPPPSEPLADPLVHGGGFLPEDDAFSSPSDNPELAEAEPAKKNQKKKAAPTIYYASRTHSQISQVIRELRKTTYRVPMAVLASRKHYCTNKNILGKENINEECKLLLKDQEIGCPEFKNAHKVKGHPSLQKGGCNEVHDIEDLIKVGHSVKGCSYYAARNMSDDAQLVFCPYSYIINPVIRGAMDLDIKGAILILDEAHNIEDITRDAGSVDIQEDDFDKLQMELQQLCSVNAAIYQPLYEMAQGLTSWIERKKNNLDKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAIRIATDLETDKPHLSGMSVITLEGLFSSLTYFFSRNGSHMLDYQLALQRCVRKDAVRAFGNWTHTFSLWCLNPAVVFRDVADLSLSIILTSGTLSPMSSFSSELGVQFETNLEAPHVIDICTQVWPAVISTGPGNYPLNASYKTADGYAFQDAVGRSLEEIFNIVPGGCLVFFPSYKLMEKLCNRWTETGQWSRLNAKKPLYVEPRAGGQDDFETTLKGYYDSIHHGKKLGARRKRRIKEVDSNHSHPVDSQEGFEKGGAALLGVCRGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVSLKKKYNDMYKSSKNLLSGSEWYCHQAFRALNQAAGRCIRHKLDYGAIILLDERLREERSRAFISKWLRRNLKVYDNFELSIEGLKSFFEDAKEWHAMNTVNVKQNLSLHTDGVNIKGQNKRFTRKKNQKLNKSCNGFEKEGSIIEDHGSFPVLSCQDLVDSQPSAQGNSNKYNCEDHINPQICNLTEERFNRDLFVASTLGECSSIKETPCIDVNSDPGSPGFSKDDNSVSTIIEASAQFSNHLSSLSVCLPDGSKNSSGLHSSVTVTPEKNIARNNVPETESPVNTSVNSHYQKRRKTMLSPFITEGIWCVEDGCVFSSVLCPFCSDRNNLLGVQIIATNSSNIQLLEKILFYYDSLEVKSYEESASGVSKDVDLKPVNVNDRGMNGIAVLSSIDKYSYVPRPKISEQRLRGLPSEENQS* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0008 1119 MobiDBLite consensus disorder prediction 119 149 - -
Ahy16g0008 1119 Gene3D - 533 779 IPR027417 -
Ahy16g0008 1119 Gene3D - 44 354 IPR027417 -
Ahy16g0008 1119 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 34 368 IPR014013 GO:0005524
Ahy16g0008 1119 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 27 1001 IPR045028 -
Ahy16g0008 1119 Pfam DEAD_2 154 317 IPR010614 GO:0003677|GO:0003678|GO:0005524
Ahy16g0008 1119 SMART deadxpd 36 360 IPR006554 GO:0003678|GO:0016818
Ahy16g0008 1119 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 291 300 IPR002464 -
Ahy16g0008 1119 PANTHER FANCONI ANEMIA GROUP J PROTEIN 27 1001 - -
Ahy16g0008 1119 SMART Cxpdneu3 574 754 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Ahy16g0008 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 748 IPR027417 -
Ahy16g0008 1119 CDD SF2_C_XPD 521 751 - -
Ahy16g0008 1119 Pfam Helicase C-terminal domain 556 767 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0008 Ahy-Chr16 69650 79648 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0008 K15362 - gmx:100779610 1519.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0008 16 69650 79648 Ahy16g0008 16 69650 79648 ECH