Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3600 ATGAGTTCATTCTTTGATGAACAGGCACCATGTTGTGGAACTCATTTTTGGGTTATGGTAATCATGTGTTGGATCTTTGTACTATTTGCTGCTATCACATCTGGTTTAGCTCTTGGGCTCTTGTCCTTTAGCCAAGTTGATCTTGAGGTTCTTGTTAAAGCTGGCCAACCTCATATTCAGAAAAATGCTGCAAAGATTATGCCAATTATTAAGAATGAGCATTTACTTTTAAGCGCCCTCCTCATAGCTAAATCATTGGCATTGGAGGGGGTTTCTGTTTCTATGGAGAAAATGTTCCCAGAGTGGCTTGCAGTAATCATATCAGCTACCCTTTTAGGTATCATTGCTGAGATTATCCCTCAAGCATTGTGCTCTAGATATGGTTTGAGTGTTGGGGCAACCATGACTCCCTTTGTGAAAGTACTTCTGTTGATTTTCTTCCCCATTGCATATCCAATTAGTAAGGTGTTGGATTGGCTTTTTGGCAAGGGGCATAGTGCACTTCTAGGAAGAGAAGAGCTCAAGGCTTTGGTTCATTTACATTCCAATGAGGCAGGTAAAGGGGGAGAGTTGTCACTACATGAAGCTACAATAATTGCTGGAGCATTAGACTTAACTTTGAAGACTGCTAAAGATGCCATGACACCAATAAGTGAAACATTTTCTCTGGACATTAACTCCAAACTCAACATGCATACAATGGCCTTGATAATGAGCAAAGGTCACAGCCGTATACCAATTTATTCTGGAATACCAACAAATATTGTTGGTATTATCCTGGTCAAGAATTTAATCTTCTGTCGTCTGGAAGACGAAACGCCCATTAAACATATGACGATTAGGAGAGTTCCTAGAGTAGGTGAAAATTGGCCACTATATGAGATCTTGAATCAATTTCAAAAGGGTCAAAGCCATATGGCTGTTGTCATCAAGGGTGAAGTGAACATCAAAGATGCTGCAACTGATTCACATGGACTTCGCGCCTTTGAAATGGTTGATTATACTAGTATGTCAACTGATGCATCAAATTTGACCTCACAAGAAACAGAATATTATAGTGCAACACTAAAGAATACCATGAAGCTAGAGGGTGACTCGGATGCATTGCGCGCAAGATCACGATGCGAAAGCGAAGCAAATGCATCATTTGAGAACGTGGAAGCTCTTAATGTTCATGAAGAAGTAATTGGGATAATAACATTGGAAGATGTTATGGAAGAGCTACTTCAGGATGATATACTGGATGAAACTGATCAATATGTTGATGTTCATCAAAATATCAAGATCAAACTGCAAAATCCAAGAAGAATGTCATCAGGGTCCTCCAGAAGATCCTCAAATTCTAATCAATGGTGGAGAAATTCAGACGCATCTCGAGTTTGCTTCTTAACTCCTACATATGTTTCACCCATTTCGGAAACTAACCAGAACTGA 1434 0.3961 MSSFFDEQAPCCGTHFWVMVIMCWIFVLFAAITSGLALGLLSFSQVDLEVLVKAGQPHIQKNAAKIMPIIKNEHLLLSALLIAKSLALEGVSVSMEKMFPEWLAVIISATLLGIIAEIIPQALCSRYGLSVGATMTPFVKVLLLIFFPIAYPISKVLDWLFGKGHSALLGREELKALVHLHSNEAGKGGELSLHEATIIAGALDLTLKTAKDAMTPISETFSLDINSKLNMHTMALIMSKGHSRIPIYSGIPTNIVGIILVKNLIFCRLEDETPIKHMTIRRVPRVGENWPLYEILNQFQKGQSHMAVVIKGEVNIKDAATDSHGLRAFEMVDYTSMSTDASNLTSQETEYYSATLKNTMKLEGDSDALRARSRCESEANASFENVEALNVHEEVIGIITLEDVMEELLQDDILDETDQYVDVHQNIKIKLQNPRRMSSGSSRRSSNSNQWWRNSDASRVCFLTPTYVSPISETNQN* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3600 477 PANTHER CBS DOMAIN PROTEIN 6 474 - -
Ahy15g3600 477 Gene3D - 365 416 IPR046342 -
Ahy15g3600 477 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 6 474 IPR045095 GO:0010960
Ahy15g3600 477 Gene3D - 195 332 IPR046342 -
Ahy15g3600 477 SUPERFAMILY CBS-domain pair 199 410 IPR046342 -
Ahy15g3600 477 Pfam Cyclin M transmembrane N-terminal domain 23 184 IPR002550 -
Ahy15g3600 477 CDD CBS_pair_CorC_HlyC_assoc 209 310 IPR044751 -
Ahy15g3600 477 ProSiteProfiles CNNM transmembrane domain profile. 12 195 IPR002550 -
Ahy15g3600 477 MobiDBLite consensus disorder prediction 432 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3600 Ahy-Chr15 158728272 158732315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3600 K16302 - gmx:100798424 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3600 15 158728272 158732315 Ahy15g3600 15 158728272 158732315 ECH
Ahy15g3600 15 158728272 158732315 Ahy5g3185 5 113723339 113726841 hybridization