Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3581 ATGACGGATGTGATACTGCATATATACGATGTGACGAATAGTGGATCGGAGAAGACGAACAGCACCATTGTTCAGATCAACAAGATCTTCAAGGACGGGATTGGTCTCGGTGGCATCTTCCACAGCGCCGTTCAGGTTTATGGTGAAGATGAATGGTCATTTGGATTCTGTGAGCAAGGTACTGGAGTTTTTAGTTGCCCTTCTGGAAAAAATCCAATGTACACATACCGAGAATTTATTGTTCTAGGGAAAACAAGTTGTTCCATTTTCAAGGTAAATCAAATATTGAGAGAACTCAGTAGAGAGTGGCCTGGGTGTTCGTACGATCTATTGGCCAAAAACTGCAACCACTTCTGCGATGAATTCTGTGAGAGGCTTGGTGTTCCAAAACTTCCAGGTTGGGTTAATAGGTTTGCGAATGCTGGTGACACTGCTATGGAAGTGGCTGGAAATACAGCAATACGTTTGAGGCAAGCCAAGACAGAGGTTGTATCGGCAAGCAAAGTAGCATTACGGTTCCTTGTAGGTCTTACCAATAATGTCAGAAATGGTGCTCCACCAGAGTCCCCTAATTCAAACAGAGGAGGAGCATCAGCATCACCTAGATTTCAAGCTTCTTGGTTGAAAAATATGATTACCACTGGTGCAAAACCATCTACTAGTTCAGAAGCTGAGAATGAGAACGGGGTTGAGCCTCGACGACCACCGACGCATGAAGATGACAAGGCACTGCTACGGAGTTCATCATCTTCACATGATTCTTGA 765 0.4431 MTDVILHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVYGEDEWSFGFCEQGTGVFSCPSGKNPMYTYREFIVLGKTSCSIFKVNQILRELSREWPGCSYDLLAKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTAIRLRQAKTEVVSASKVALRFLVGLTNNVRNGAPPESPNSNRGGASASPRFQASWLKNMITTGAKPSTSSEAENENGVEPRRPPTHEDDKALLRSSSSSHDS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3581 254 Pfam PPPDE putative peptidase domain 3 147 IPR008580 GO:0008233
Ahy15g3581 254 MobiDBLite consensus disorder prediction 227 254 - -
Ahy15g3581 254 Gene3D PPPDE domains 1 169 IPR042266 -
Ahy15g3581 254 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Ahy15g3581 254 MobiDBLite consensus disorder prediction 180 254 - -
Ahy15g3581 254 PANTHER PPPDE PUTATIVE THIOL PEPTIDASE FAMILY PROTEIN-RELATED 1 228 - -
Ahy15g3581 254 SMART DUF862_2a 2 157 IPR008580 GO:0008233
Ahy15g3581 254 PANTHER DESUMOYLATING ISOPEPTIDASE 1 228 IPR008580 GO:0008233
Ahy15g3581 254 MobiDBLite consensus disorder prediction 182 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3581 Ahy-Chr15 158584556 158587149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3581 - - gmx:100786944 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3581 15 158584556 158587149 Ahy15g3581 15 158584556 158587149 ECH
Ahy15g3581 15 158584556 158587149 Ahy5g3167 5 113567227 113569815 hybridization