Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3560 ATGGCACTAGCTTCTATTCCAAAAGTTGTGTTAGGCTCACTAGCCTTTGCAATTTTCTGGGTATTAGCAGTGTTCCCAGCTGTTCCTTTTCTACCAATTGGAAGAACAGCAGGATCATTGCTTGGTGCAATGCTTATGGTCATATTTCGAGTTCTTTCGCCGGATCAAGCCTACGCCGCAATTGATCTTCCAATTCTTGGCCTTCTTTTTGGAACAATGGTTGTGAGTGTGTATCTTGAAAGAGCAGACATGTTCAAGTACTTGGGAAAATTGCTATCTTGGAAGAGTAAAGGCCCAAAAGATTTGCTTTGTAGAATCTGTTTGATTTCTGCAATTTCAAGTGCTCTTTTCACCAATGACACTTCTTGTGTTGTTTTGACTGAATTCATATTGAAAATTGCAAGGCAGCATAATTTGCCACCACACCCTTTTCTTCTTGCACTTGCTTCAAGTGCTAACATTGGTTCCTCAGCAACTCCAATTGGGAATCCTCAGAATCTTGTTATTGCTGTTCAGAGTAAGATTCCATTTGGAGAGTTTCTAGTTGGTGTTCTTCCAGCTATGCTTCTTGGGGTTGTGGTGAATGCTTCAATTCTTATATTGATGTATTGGAAGTTGTTGTCTGTTCACAAAGATGAGGAGGATCCAAAAGCAGAGGTTGTAGCAGAGGAGGAGGTTAATTCTCATCAGTTTTCGCCGGCTACAATGTCTCATTTTACTTCCATGAATTCACAAGAGTGGAATATGTGTCTGGACAATGTTAGCATTCAAAACTCTCCTCAAGTTCAGACCTTGAGAAACCGGGCATCTCCGAATGAAGGCGAAATTTACAGGGTTCCTAGTAGCATTGTGGATTCCTCGAGGAACTCGAATGCGTCGAAGGAGGCAGCGAATGAAGTGGCTGAGAAGACAAGGGAGGATCATAATCATGTCAAGGTTGTTGCAGCAGAATCAAATAGTTTTGTTATGCACTTTGCAGAAGGAAGAATGGACTTTTTGGATGAGAAGTGGAAAAGGGTTTTGTGGAAATGTTGTGTTTATATGATCACTTTAGGGATGTTGATTGCAATGCTTTTAGGTTTGAATATGTCTTGGACTGCAATCACAGCTGCACTAGCCCTGGTTGTTCTTGATTTCAAAGATGCTAGGCCATGCTTAGAGAAGGTTTCCTATTCACTTTTGATATTCTTTTGTGGAATGTTTATCACAGTAGATGGGTTCAACAAAACTGGAATTCCAAGTGCTATGTGGGAATTGATGGAGCCATATTCCCATGTAGATCATGCCACTGGCATAGTAGTACTTGCACTTGTTATACTAGTCCTTTCAAATTTGGCTTCAAATGTTCCAACAGTTCTGTTGCTTGGAGGGAGAGTAGCAGCATCAGCAGCAGCAATATCAGCAAAAGATGAGAAGAAAGCATGGCTGATATTGGCATGGGTAAGCACCATTGCAGGGAACCTCTCACTGTTGGGATCAGCTGCAAACTTGATAGTGTGTGAACAAGCTCGTAGAGCACCAAATCTTGCTTACACCTTAACCTTCTGGAACCATCTCAAGTTTGGTCTTCCTTCCACTCTCATTGTCACTGCTATTGGTTTGACTCTCATAAGATAG 1617 0.4156 MALASIPKVVLGSLAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFRVLSPDQAYAAIDLPILGLLFGTMVVSVYLERADMFKYLGKLLSWKSKGPKDLLCRICLISAISSALFTNDTSCVVLTEFILKIARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVQSKIPFGEFLVGVLPAMLLGVVVNASILILMYWKLLSVHKDEEDPKAEVVAEEEVNSHQFSPATMSHFTSMNSQEWNMCLDNVSIQNSPQVQTLRNRASPNEGEIYRVPSSIVDSSRNSNASKEAANEVAEKTREDHNHVKVVAAESNSFVMHFAEGRMDFLDEKWKRVLWKCCVYMITLGMLIAMLLGLNMSWTAITAALALVVLDFKDARPCLEKVSYSLLIFFCGMFITVDGFNKTGIPSAMWELMEPYSHVDHATGIVVLALVILVLSNLASNVPTVLLLGGRVAASAAAISAKDEKKAWLILAWVSTIAGNLSLLGSAANLIVCEQARRAPNLAYTLTFWNHLKFGLPSTLIVTAIGLTLIR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3560 538 Pfam Citrate transporter 27 485 IPR004680 GO:0016021|GO:0055085
Ahy15g3560 538 PANTHER TRANSPORTER ARSB-RELATED 1 538 - -
Ahy15g3560 538 PANTHER TRANSPORTER ARSB-RELATED 1 538 - -
Ahy15g3560 538 CDD YbiR_permease 28 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3560 Ahy-Chr15 158364241 158367493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3560 - - cit:102622728 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3560 15 158364241 158367493 Ahy15g3560 15 158364241 158367493 ECH
Ahy15g3560 15 158364241 158367493 Ahy5g3150 5 113312393 113315664 hybridization