Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3558 ATGTTATATGTGTGTGTGAATCGTGGATTTGTGATTCATAAATTCGCGACAAACCATCTAGGTCATTTTCTGTTAACAAATCTTTTGTTGGATACAATGAAGAAAACTGTACATGAAAGTAAGAAAGAAGGAAGAATTATTAATGTCTCCTCGACTGGTCACCAATACTTTAGATATAGCGAAGGAATACGTTTTGATAAAATTAATGATCAATCAAGTTACAAGAGTTGGATTGCATATGGACAATCAAAACTAGCTAACATTTTACACGCAAACGAACTTGCACGGCGTCTCAAGGAAGATGGGGTGAATATCACTGCAAATTCCGTTCATCCAGGAATAGTTGTCACCAATATTTTCCGTCATAACAACATAGTGAATGGTGTGATGAACATGCTCGCGAGATGCGGGCTTAAAAATGTTAAGCAGGGAGCAGCAACAATATGTTATTTGGCATTGCATCCACAAGTGAGTGGAATAAGTGGAGAGTTTTTTATGGATGGTTATGTGGCCAAAGCAAGCTCACAGGGAAGGGATATTGATTTGGCCAAGAAACTCTGGGATTATAGCATGAATTTGACCGAGCAGAATACATAG 597 0.3802 MLYVCVNRGFVIHKFATNHLGHFLLTNLLLDTMKKTVHESKKEGRIINVSSTGHQYFRYSEGIRFDKINDQSSYKSWIAYGQSKLANILHANELARRLKEDGVNITANSVHPGIVVTNIFRHNNIVNGVMNMLARCGLKNVKQGAATICYLALHPQVSGISGEFFMDGYVAKASSQGRDIDLAKKLWDYSMNLTEQNT* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3558 198 PANTHER SHORT-CHAIN DEHYDROGENASE TIC 32 13 195 - -
Ahy15g3558 198 Gene3D - 11 198 - -
Ahy15g3558 198 PRINTS Glucose/ribitol dehydrogenase family signature 80 99 IPR002347 -
Ahy15g3558 198 PRINTS Glucose/ribitol dehydrogenase family signature 38 54 IPR002347 -
Ahy15g3558 198 PRINTS Glucose/ribitol dehydrogenase family signature 103 120 IPR002347 -
Ahy15g3558 198 PANTHER RETINOL DEHYDROGENASE 13 195 - -
Ahy15g3558 198 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 171 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3558 Ahy-Chr15 158350609 158352565 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3558 - K19329 aip:107641531 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3558 15 158350609 158352565 Ahy19g3574 19 158386337 158389105 ECH
Ahy15g3558 15 158350609 158352565 Ahy15g3558 15 158350609 158352565 ECH