Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3542 ATGGCGAACGCGGCGTCAGGAATGGCAGTTAGCGATGAATGTAAATTGAAATTCTTGGAGTTGAAAGCAAAGAGGAATTCCCGTTTCATTGTATTCAAGATTGTGGATCAAGCAGTGGTGGTGGACTCCATTGGAGGCCCACAAAATACTTACGATGATTTCACGAAGGCTCTGCCTCCAAATGAGTGTCGTTATGCTGTCTTTGATTTTGATTTCACCACTCATGAGAATTGCCAAAGAAGCAAGATTTTCTTCATTGCCTGGTCTCCAGATTCAGCAAAGGTGAGACAAAAAATGGTGTATGCGAGCTCCAAAGACAGGTTCAAGAGAGAACTTGATGGTATTCAGGTTGAGTTGCAAGTAACAGATCCTAGTGAAATGAGCATGGACATCATAAAAGCTAGGGCATACTAA 414 0.4251 MANAASGMAVSDECKLKFLELKAKRNSRFIVFKIVDQAVVVDSIGGPQNTYDDFTKALPPNECRYAVFDFDFTTHENCQRSKIFFIAWSPDSAKVRQKMVYASSKDRFKRELDGIQVELQVTDPSEMSMDIIKARAY* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3542 137 SUPERFAMILY Actin depolymerizing proteins 2 135 - -
Ahy15g3542 137 PANTHER COFILIN-RELATED 2 136 IPR017904 GO:0015629|GO:0030042
Ahy15g3542 137 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 2 136 - -
Ahy15g3542 137 SMART adf_2 12 137 IPR002108 GO:0003779
Ahy15g3542 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
Ahy15g3542 137 ProSiteProfiles ADF-H domain profile. 7 137 IPR002108 GO:0003779
Ahy15g3542 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
Ahy15g3542 137 Gene3D Severin 1 137 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3542 Ahy-Chr15 158182179 158184406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3542 K05765 - cpep:111810346 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3542 15 158182179 158184406 Ahy15g3542 15 158182179 158184406 ECH