LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy15g3518	ATGGATTCTAGACAAGTCCAAAGTCATGACTACGATGAACATCACAATCATCCACATGGCCATGATGTTGGCATTGGCATACATCAAGTTCTTCATGGTTCAGATGAGCACCAACATGACCATGAGAAGAAGTCTGTTGTTAAGAAAGTGAAGGCAAAGGCCAAGAAAATCAAGGACAAAGTCACCAAGCATGGTCATCATGACAATGAACATGATCATGATCAGTATCACTATGAAGGTCAACATATCCCTGATGATCATGATTTGGATGAGGAAGATGATGAAGATGAAGAAATGATTGAAGACCCTGAAGTCCATGGTGCACCAATTTATGATAGTACTGCTTTTAGAAGTGCTGTACCAGGGAAAACACAATACTTGGCAAGTCCTAATGTTAATTTAGGAGGTACATCAGTTATGGGAGTAGAACCCCATCATCACCAGCCAAGAGTTGTGGTTGTTTCTTCAACTGCTGAACCTGATCAAAGCAGAGTCACTGATCCAAGTAAAACATTTGCTGGGGTTGGAGAAGACGAGGCAATGCATCATAAGGTTAATTTGGAGAGACCAATGGGATTGGAGGAAGATCCTCATGCGCCACGTAGTAGTCCTCTATCACATGCTCATGCCAATTACCAAACCAAAGTCACTGATCCTACTGGAGCAGGTGGTGGAGAAATTGATATCACCCCAGTTGAGAGATCATTGGAAAGAATGAATATCCAAAATGAGCCAAGAGCTGACCAAGAATCCAAGGTTCTTCCAACTATTTCAGAGACTCAATATCCTTCTCATCTTGGTGGGCTTGGCCACTACAACCACCGATTTTCACCTGAGCTTTCAACAGCAACCAAAACTCCATTCCCAACAGCTGATAAAAGCCATTATCAGCACTTGCCACACTTGTCAGGCGAAATCAAAACTCAATACCCGTCTGCTGGAAGCCATGATCAATTCGTGCCGGAATTTTCTCACACACACTGCCCTCCAATTAAAAGCCATGACCAAAACTTGACACAAGAGTCAACAGTTCAGTATCCTTCTACTGAAAGCCATAATCAGTTTTCAGCAGAAACAATTCCTAGAAGTTCTAATATATATGAACAAAATCCTCTGCAAGAACCAGCTTCCGACACCACCAAGGCAAGATTTGAAGAACAAACGCAACCACCTTATAAAGCAATGGAGAAACCATCAAGTCAAAGCAGTTACACTGACAAAATCTCTTCAGCTACTTCAGCTATAGCTGATAAAGCCATCACTGCTAAAAATGCTGTGGCCTCCAAGCTTGGATATGGTGAAAAAGATGATAAAACAAAGTGCCATGAAGAAAACATAAGCAGTGATAAACCATCGAACCAGAGCAGTTACACTGAGAAAATATCGTCCGCAACTTCAGCAATAGCCGATAAAGCTGTGTCAGCTAAGAACACAGTAGCTTCGAAACTAGGTTATGGCGACAAAGGTGACAGCCACGAAGAGACACAAGGAGAGAATGCTGCTGCTACTTCCACAACAGAATATGGGAAGAGAATAGCACAGTCCTTGACAGATAAACTTGCACCGGTTTATGGAAAGGTTGCTGGTGTAGGAAGTGCAGTGAAATCAAAGGTTCCTGGAACCTCAACTGGCAGTGAAAACGATAGAGGAGTGTCAGTGAAGGACTATTTTGCAGAGAAGTTGAGGCCTGGGGATGAAGACAGAGCTCTATCTGAGGTTATATCAGAGACTCTGCATCATAAGAGGAACAAAGAAGAGGAAAATGTAGTTCACAAGAGAGGAGAAGAGGAGGAGGAGGAGCATGAGAGAAGGAAGAAGATACCAATGGGGAAGGTGACAGAGTCTGAAGAAGTGAAGAGAAGGTTGGGGGTTGGAAATGAAGAGACAGAGAGGTATGAAGAGAGCTATGTAAATAGTCCTGGGAAGAGTGTGGTTGATAAGGTTAAGGATGTGGTTTTTGGTTCTTGGTTTACCAAACCGGATGAAAATCAACCGTCAGAAGGTGGGGAACAGGTCCCCAAGAACTCTGGTGCTGTGGACGTGGATCAGGCGGTGAACCAAGCCGCGGATGCAAGACGACTCCATGAGTCATGTAATTGA	2100	0.4348	MDSRQVQSHDYDEHHNHPHGHDVGIGIHQVLHGSDEHQHDHEKKSVVKKVKAKAKKIKDKVTKHGHHDNEHDHDQYHYEGQHIPDDHDLDEEDDEDEEMIEDPEVHGAPIYDSTAFRSAVPGKTQYLASPNVNLGGTSVMGVEPHHHQPRVVVVSSTAEPDQSRVTDPSKTFAGVGEDEAMHHKVNLERPMGLEEDPHAPRSSPLSHAHANYQTKVTDPTGAGGGEIDITPVERSLERMNIQNEPRADQESKVLPTISETQYPSHLGGLGHYNHRFSPELSTATKTPFPTADKSHYQHLPHLSGEIKTQYPSAGSHDQFVPEFSHTHCPPIKSHDQNLTQESTVQYPSTESHNQFSAETIPRSSNIYEQNPLQEPASDTTKARFEEQTQPPYKAMEKPSSQSSYTDKISSATSAIADKAITAKNAVASKLGYGEKDDKTKCHEENISSDKPSNQSSYTEKISSATSAIADKAVSAKNTVASKLGYGDKGDSHEETQGENAAATSTTEYGKRIAQSLTDKLAPVYGKVAGVGSAVKSKVPGTSTGSENDRGVSVKDYFAEKLRPGDEDRALSEVISETLHHKRNKEEENVVHKRGEEEEEEHERRKKIPMGKVTESEEVKRRLGVGNEETERYEESYVNSPGKSVVDKVKDVVFGSWFTKPDENQPSEGGEQVPKNSGAVDVDQAVNQAADARRLHESCN*	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	155	180	-	-
	Ahy15g3518	699	PANTHER	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	437	684	IPR037491	GO:0009737
	Ahy15g3518	699	Pfam	CAP160 repeat	408	433	IPR012418	-
	Ahy15g3518	699	Pfam	CAP160 repeat	461	487	IPR012418	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	58	100	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	370	386	-	-
	Ahy15g3518	699	PANTHER	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	1	451	IPR037491	GO:0009737
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	656	699	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	434	458	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	1	24	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	575	622	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	155	169	-	-
	Ahy15g3518	699	PANTHER	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	1	451	-	-
	Ahy15g3518	699	PANTHER	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	437	684	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	483	506	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	1	22	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	370	405	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	86	100	-	-
	Ahy15g3518	699	MobiDBLite	consensus disorder prediction	63	85	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy15g3518	Ahy-Chr15	157914778	157918031	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy15g3518	-		-	ahf:112802849	1243.8

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy15g3518	15	157914778	157918031	Ahy15g3518	15	157914778	157918031	ECH