Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3508 ATGGAGATTCGAGTAAGATGCAACTGCGGAGAAGATAAAGAAGAAGAAGGAAGATGCAAAGAATGGGCCATCGTTGAACTCCAAGGCGTCGTCGAACCCCAACCAGGTTTCCATGACTCCCTCCCAAACCTTCAAATCGGAACTCTCTGCCGTCCTTCTTCTCAGGAAGTGTATACTTTGACTATTGGGTATCACGAGCTGACTGGGTCAAAGGTTCCTCTGAAGAAGCCAATGATGGTGCTCAAGAAAGTGAAGCACTCTCCCATTGACAGAGGAGAAAGCAGCGGTTGTGGTGAGGTTGAGCTTCAAGTTGTTGGAATCATTCGACATAGGATCCTGTTCAAGAACAGACCTAAAGCCCTCATTTCTAAACCACAGCCAACATCAAAGGAAAGACAAAAGTCTATCATGTTGGGTTCTGTTCCTTCAAATCAAGCTTTGTGA 444 0.4572 MEIRVRCNCGEDKEEEGRCKEWAIVELQGVVEPQPGFHDSLPNLQIGTLCRPSSQEVYTLTIGYHELTGSKVPLKKPMMVLKKVKHSPIDRGESSGCGEVELQVVGIIRHRILFKNRPKALISKPQPTSKERQKSIMLGSVPSNQAL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3508 147 MobiDBLite consensus disorder prediction 123 147 - -
Ahy15g3508 147 Pfam Ctf8 52 119 IPR018607 GO:0007064|GO:0031390
Ahy15g3508 147 PANTHER CHROMOSOME TRANSMISSION FIDELITY PROTEIN 8 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3508 Ahy-Chr15 157828283 157832794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3508 K11270 - gmx:100807992 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3508 15 157828283 157832794 Ahy15g3508 15 157828283 157832794 ECH
Ahy15g3508 15 157828283 157832794 Ahy5g3096 5 112651071 112655568 hybridization