Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3401 ATGGCCTTCGATTCGTGGCTCGGTAGGGTAAAAACCGCGCTTTCCAACGGGAAGAATCCCAAGTCAAAACGCGTTGCCGTTTTGTCATTCGAGGTCGCCGGCGTCATGTCGAGGCTCCTTCACCTCTATCAGTCGCTATCCGACGCCGCCGTCGTTCGCCTTCGAAACGATGCCGTTTCTCTTGAGGGTGCATTGAAGCTCGTTTCCAACGACGAGTCGTTCCTCCTCAGACTCGCCCGAGCCGAACTCGCTGAGTCAGTTCGAGTCGCGGCCGGCTCGGTGTCCCGACTCAGCTGCATGTGCAGCGATCCTTTTCTCCGATCGTTCCACCGAGTCTTCACCGAGTTTGCTAACTCGGGCTACGACCCGCACGCGTGGACACTCACCAATCCGAAGGAAATCGAAGCCAAACACAAGAAATTGGAGCGTTACGTGTCACTCACGTCAACGCTTCACAGAGAAATGGAAGAGCTTTCGGTTCTAGAAAGTGCGTTGAGAAAAGCACTTAGCCATAGTAGTAACAACAATAATGGTGAAGCTGAACCTTGTTCAGTTAACAATAAGGATCATCAGAAACTCTGTGATCTTCAGCAAAAGATTTTCTGGCAGAAGCAAGAGGTTAAGGAGTTAAAGGAGAAATCTTTGTGGAATAAAGGTTTCGATGGCGTTGTTTTGTTGCTTGTTAGGTTTGTTTTCACTGTGTTAGCAAGGATTAAGGTTGTGTTTGGAATTGGGCATTGTGTTCCTTATTTGTCTCGTAGTTTATCAGCTTCAGCCACTGTTTTTCCCTCCGATCAAAATCCCAATAGTGAAAATTATGCTATTCATGTTTCTAGGCCGTTCAAAAGTTTGAAGCTTGATGGGAATGGTGATTTGGGGTGTGGTGGTTTTTTTGAGTCTAATTGTAAGTTATTGAAGCCAATGAATGGTACTTTAGGTGCTTCAGCTTTGGCATTTCATTATGCCAATTTGATCATAGTTATGGAGAAGATGATAAAGTCACCACAATTGGTTGGTGTTGAAGCAAGGGATGATTTGTATGCAATGTTGCCAAGTAGCATAAGATCATCACTGAGGTCAAGATTGAAAGGTGTTGGATTCTCTGCTTGTGATCCTGTTCTTGCTGGAGAATGGAGAGAAGCATTGGGGAGGATTCTTGGTTGGATTTCACCATTGGCACATAACATGATTAGGTGGCAGAGTGAGAGGAGCTTTGAGCAGATGAACATGATGGTTCCAAAGACCAATAGTAATGTGTTGTTGTTGCAGACTTTGTTCTTTGCAGACAAAGAGAAGACAGAAGCTGCCATAACTGAGCTGCTTGTTGGTTTGAACTATATTTGGAGGTTTGAGAGAGAAATGACTGCTAAGGCTTTCTTTGAAGGATGCAACAACAGTTTCAATGGCTTGTTAAATGTTAACCATTCAGAAACCCAGTTAAGGACTTGA 1449 0.4486 MAFDSWLGRVKTALSNGKNPKSKRVAVLSFEVAGVMSRLLHLYQSLSDAAVVRLRNDAVSLEGALKLVSNDESFLLRLARAELAESVRVAAGSVSRLSCMCSDPFLRSFHRVFTEFANSGYDPHAWTLTNPKEIEAKHKKLERYVSLTSTLHREMEELSVLESALRKALSHSSNNNNGEAEPCSVNNKDHQKLCDLQQKIFWQKQEVKELKEKSLWNKGFDGVVLLLVRFVFTVLARIKVVFGIGHCVPYLSRSLSASATVFPSDQNPNSENYAIHVSRPFKSLKLDGNGDLGCGGFFESNCKLLKPMNGTLGASALAFHYANLIIVMEKMIKSPQLVGVEARDDLYAMLPSSIRSSLRSRLKGVGFSACDPVLAGEWREALGRILGWISPLAHNMIRWQSERSFEQMNMMVPKTNSNVLLLQTLFFADKEKTEAAITELLVGLNYIWRFEREMTAKAFFEGCNNSFNGLLNVNHSETQLRT* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3401 482 Pfam Protein of unknown function (DUF668) 311 398 IPR007700 GO:0045927
Ahy15g3401 482 Pfam Domain of unknown function (DUF3475) 27 82 IPR021864 GO:0045927
Ahy15g3401 482 PANTHER DUF3475 DOMAIN PROTEIN 1 474 - -
Ahy15g3401 482 PANTHER BNAC09G50660D PROTEIN 1 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3401 Ahy-Chr15 156517226 156519160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3401 - - gmx:100801628 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3401 15 156517226 156519160 Ahy15g3401 15 156517226 156519160 ECH
Ahy15g3401 15 156517226 156519160 Ahy5g1884 5 86986916 86989203 hybridization
Ahy15g3401 15 156517226 156519160 Ahy19g1944 19 113593321 113595650 PCT
Ahy15g3401 15 156517226 156519160 Ahy9g1577 9 85674981 85677179 PCT
Ahy19g1944 19 113593321 113595650 Ahy15g3401 15 156517226 156519160 PCT
Ahy9g1577 9 85674981 85677179 Ahy15g3401 15 156517226 156519160 PCT