Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3390 ATGGGGAACACCTTCTGCTTCTTCTGCGGATGCATCCAGCAGTCCAACGTCGGCGTGGTCGAGAAGTGGGGCCGCTTCAGCCGCCTCGCCCAACCTGGCTTCCACTTCTTCAACCCTCTCGCCGGTGAGTGCCTCGCCGGCCTCCTCTCCACCAGGATCTGCTCCCTTGACGTCCGCGTCGAGACCAAGACCAAGGACAACGTGTTTGTGCAGCTGCTGTGCTCGATTCAGTACCGTGTTGTGAAGGAGAACGCTGATGATGCTTTTTACGAGCTTCAGAACCCTCAGGAACAGATCCAGGCTTATGTCTTTGATGTCACTCGCGCTATTGTTCCCCGAATGAACTTGGATGAACTCTTTGAGCAGAAGGATCATGTTGCCAAAGCTGTTCTCGAAGAGCTTGCTAAGGTGATGGGAGACTATGGATTTAGCATAGAGCACATACTCATGGTTGATATTATACCTGATCCTTCTGTTCGTAAGGCCATGAATGAGATCAATGCAGCTCAAAGGATGCAACTAGCTAGTGTGTACAAAGGAGAAGCTGAGAAGGTGCTTCAGGTTAAGAAAGCCGAGGCAGAGGCCGAATCCAAGTACTTGGGAGGTGTTGGTGTGGCCAGGCAGAGGCAAGCTATCACAGATGGCTTGAGAGAGAACATCTTGAATTTCTCCCACAAGGTGGAAGGTGCCTCTCCCAAGGAGGTCATGGATCTTATTATGATCACTCAGTACTTCGACACCATCAAAGACCTTGGCAACTCCTCTAAGAACACCACAGTTTTCATACCCCATGGCCCTGGCCATGTTAGGGATATTGGTGATCAGATACGCAATGGACTCATGGAAGCTTCCAGTGCTCAAGTAAATCTCGACTGA 876 0.5068 MGNTFCFFCGCIQQSNVGVVEKWGRFSRLAQPGFHFFNPLAGECLAGLLSTRICSLDVRVETKTKDNVFVQLLCSIQYRVVKENADDAFYELQNPQEQIQAYVFDVTRAIVPRMNLDELFEQKDHVAKAVLEELAKVMGDYGFSIEHILMVDIIPDPSVRKAMNEINAAQRMQLASVYKGEAEKVLQVKKAEAEAESKYLGGVGVARQRQAITDGLRENILNFSHKVEGASPKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGDQIRNGLMEASSAQVNLD* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3390 291 Gene3D Band 7 domain 47 169 IPR036013 -
Ahy15g3390 291 Pfam SPFH domain / Band 7 family 12 183 IPR001107 -
Ahy15g3390 291 CDD SPFH_like_u4 11 280 - -
Ahy15g3390 291 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 1 288 - -
Ahy15g3390 291 SMART PHB_4 7 167 IPR001107 -
Ahy15g3390 291 SUPERFAMILY Band 7/SPFH domain 48 172 IPR036013 -
Ahy15g3390 291 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3390 Ahy-Chr15 156391741 156393664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3390 - - gmx:100804986 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3390 15 156391741 156393664 Ahy15g3390 15 156391741 156393664 ECH
Ahy15g3390 15 156391741 156393664 Ahy5g1895 5 87183364 87185258 hybridization