Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3339 ATGGCTTTGATGAGTTTGAAGGACACTTTCTACATATCACATGGATCACCAACGTTGGCCATTGACGATTCGATTGAGATAAGGAAGGTTCTTAAATCGTGGAATCGGATTTTCCCGCAGAAACCTTCTGCCATTCTTGTTATCTCCGGTCATTGGGACACAGCAGTTCCCTCCGTCAATGTTGTTCAGAGAAACGAAACCATTTACGACTTTTATGGCTTCCCTAAACCCATGTACCAGCTTAAGTATCCAGCACCTGGGGCTCCAGAGTTGGCAAGGAGGGTGAAGGAACTACTTCAAAAATCCGGTTTTGGCCGTGTCGACGAAGACAAGAGGAGAGGGCTTGATCACGGTGCTTGGGTTCCACTCTTGTTGATGTACCCCGAAGCTGATATCCCGGTATGTCAATTGTCTGTTCAATCTGATAAGGATGGGACTCATCACTATAACATGGGAAAGGCATTGACACCTCTTAAAGATGAAGGTGTGCTTATAATTGGTTCTGGAAGTGCTGTTCACAATCTGAGAGAGCTTAGAGTTCATTCCGGCAACACTGCTGTTCCCTGGGCTCTGGAATTCGATAATTGGTTGAAAAGGGCTCTTCTTGAAGGAAGATATGAGGATGTAAACAATTGGGATAAGAAAGCGCCGCACGCGAAGAAGGCTCATCCATGGCCAGATCACTTTTATCCACTTCATGTTGCCATTGGTGCAGCTGGTGGAAATCCAAAGGCCAAAGTTATCCACAGCAATATCGAATTAGGATCTCTCTCCTATGCCTCTTTCCAGTTTACTGAAGTTTCCGACTCGTGTTCTGCTTAA 822 0.455 MALMSLKDTFYISHGSPTLAIDDSIEIRKVLKSWNRIFPQKPSAILVISGHWDTAVPSVNVVQRNETIYDFYGFPKPMYQLKYPAPGAPELARRVKELLQKSGFGRVDEDKRRGLDHGAWVPLLLMYPEADIPVCQLSVQSDKDGTHHYNMGKALTPLKDEGVLIIGSGSAVHNLRELRVHSGNTAVPWALEFDNWLKRALLEGRYEDVNNWDKKAPHAKKAHPWPDHFYPLHVAIGAAGGNPKAKVIHSNIELGSLSYASFQFTEVSDSCSA* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3339 273 Gene3D - 3 265 - -
Ahy15g3339 273 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 264 IPR004183 GO:0006725|GO:0008198|GO:0016491
Ahy15g3339 273 SUPERFAMILY LigB-like 9 264 - -
Ahy15g3339 273 PANTHER UNCHARACTERIZED 4 268 - -
Ahy15g3339 273 PANTHER EXTRADIOL RING-CLEAVAGE DIOXYGENASE-LIKE 4 268 - -
Ahy15g3339 273 PIRSF Doxgns_DODA 2 266 IPR014436 GO:0008270|GO:0016701
Ahy15g3339 273 CDD 45_DOPA_Dioxygenase 9 264 IPR014436 GO:0008270|GO:0016701
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3339 Ahy-Chr15 155679444 155681539 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3339 K15777 - gmx:100798236 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3339 15 155679444 155681539 Ahy15g3339 15 155679444 155681539 ECH